Xanthomonas perforans: BJD13_21325
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Entry
BJD13_21325 CDS
T04778
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe00040
Pentose and glucuronate interconversions
xpe01100
Metabolic pathways
xpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BJD13_21325
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJD13_21325
Enzymes [BR:
xpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BJD13_21325
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
APP01312
UniProt:
A0A0G8XZV2
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Position
4338451..4339584
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AA seq
377 aa
AA seq
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MKPKFSTAAAASLFVGSLLLTGVAYADAALEVATTGWATQNGGTKGGSKAAAANIYTVKN
AAELKAALSASVGSNGRIIKVSGIIDISEGKPYTKTSDMKSRARLDIPTKTTLIGITSNA
EIREGYMYVKANDVIIRNLTIENPWDPEPVWDPDDGSAGNWNAEYDGLTVEGASNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDIKKGANFVTVSYSAFKSHEKNNLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNKVYPFSYAHGVGKESK
IFSERNVFEISGVSSCDKIAADYGGSVYRDQGSLLNGKALSCSWNTNIGWTPPYTYNLLS
ADKVAADVKAKAGAGKL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaaattttcgacggcggccgccgcgtcgctgttcgttgggtcgttgctgctc
accggcgttgcctatgccgatgcggcgttggaggttgcaaccacgggctgggcaacccag
aacggcggcaccaagggcggctccaaagcggctgccgccaatatctacaccgtcaagaat
gccgccgagttgaaagctgcattgagcgcaagcgtcggtagcaacggacgcatcatcaag
gtcagcggcatcatcgatatcagcgaaggcaagccgtacaccaagacctcggacatgaag
tcacgtgcgcgcctggatattccgaccaagaccaccttgataggcatcaccagcaacgcg
gaaatccgcgaaggctacatgtacgtcaaggccaacgacgtcatcatccgcaacctcacc
atcgaaaatccatgggacccggaaccggtctgggacccggatgacggcagcgccggcaac
tggaatgcggagtacgacggcctgaccgtggaaggcgccagtaacgtgtgggtggaccat
gtcaccttcaccgatggccgcaggaccgacgatcagaacggcaccgccaatggccgtccg
aagcagcaccacgacggcgcgatggacatcaagaaaggcgccaatttcgtcacggtctcg
tactcggccttcaagtcgcacgagaagaacaacctgatcggctccagcgacagcgcgtcc
agcaccgacagcggcaagctcaaggtcaccattcacaacaccctgttcgaaaacatttct
gcgcgcgccccgcgtgtgcgcttcggtcaggtgcatctgtacaacaactaccacgtcggc
agcaccagcaataaggtctatccgttctcttacgcgcatggcgtgggcaaggagtcgaag
atcttctccgagcggaacgtgttcgagatcagcggtgtcagcagctgcgacaagattgcc
gccgactatggtggcagcgtgtatcgcgatcagggttccctgctcaatggcaaggcgctg
tcgtgctcgtggaataccaacatcggctggaccccgccctatacctacaacctgctctcg
gccgacaaggtcgctgcagacgtcaaggccaaggcaggcgccggcaagctctaa
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