Xanthomonas perforans: BJD13_21610
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Entry
BJD13_21610 CDS
T04778
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BJD13_21610
Enzymes [BR:
xpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
BJD13_21610
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PapC_N
Motif
Other DBs
NCBI-ProteinID:
APP01360
UniProt:
A0A0G8W9I8
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All DBs
Position
complement(4420244..4421845)
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AA seq
533 aa
AA seq
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MPRNLRHHFACALLLYAGISAPALADFGVSRSGNRVIVDSGAELVFAVDARNGDIVSMRY
RDNELQTTESKGSHIASGLGSASVDARIVGGTIVVSAKAGDLVQYYIARKGRNAIYMATD
APTLLPVGELRFVARLNVSKLPNAQQEPDSNVGRAIESEDVFLLPDGRTSSKFYSARRMM
DDQVHGVSGPGVAVFMLMGNRERSAGGPFFKDIATQKTSLTHELYNYMYSDHTQTEAFRG
GLHGVYGLLFTDGSLPSSAQLDTAFVDATLGLSGYLPASGRGTVSGHVGGVLPGQPAVIG
LRNAQAQYWATADGSGNYQVTGVRPGSYRMTLYQNELEVAQRNIEVSAGATAHAALQAVV
LPGTVKWQIGIPDGTPVGFSDADLLPRAHPSDARMHWSAVTYTVGSSSVSSFPAVQWRGI
NTPSRIDFTLPANEVRGYRLRLFVPLAQGGARPQISVNARWNGPLPAAPTQPKTRGITRG
TARGNNTLYEVDIPASALQAGNNRIEIGIASGSPDNGYLSPAIVFDSIQLVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaatcttcgacatcacttcgcctgcgcactgctgctctatgccggcatcagc
gcacctgcactggccgacttcggggtcagccgcagcggcaaccgcgtgatcgtcgacagc
ggcgccgagctggtgtttgcggtcgatgcccgaaatggcgacatcgtgtcgatgcgctat
cgcgacaacgaactgcagaccaccgaatcgaagggctcgcacatcgcttcggggttgggc
agtgccagtgtggatgcacgcatcgttggcgggacgatcgtggtgtcggccaaggccggc
gacttggtccagtactacatcgcacgcaagggccgcaacgcgatctacatggccaccgat
gcgcccaccttgctgccagtgggcgaattgcgcttcgtcgcccgcttgaacgtgtccaag
ttgcccaatgcgcagcaggagcccgattccaatgtcggcagagcgatcgaaagtgaggat
gtctttctattgccggatgggcgcaccagctccaagttctattctgcacgtcgaatgatg
gacgaccaggtgcatggcgtcagtggccctggcgttgccgtgttcatgctgatgggcaac
cgcgagcgcagcgcgggcggcccgttcttcaaggacattgcgacgcaaaaaaccagcctg
acgcatgagctctataactacatgtattccgatcacacccagaccgaagcctttcgcggc
ggcctgcacggggtgtacgggctgctgttcaccgatggaagcttgccgtcgagtgcgcag
ctggacaccgcgttcgtcgatgccacgctgggcctgagcggttatttgccggcaagcggg
cgcggcaccgtgagtgggcacgtcggcggcgtgctgccgggccagccggccgtcatcggc
ctgcgcaacgcgcaggcgcagtactgggccaccgccgacggcagcgggaactaccaggtg
acgggtgttcgcccgggcagctatcgcatgacgctctaccaaaacgaactggaggtcgca
caacgcaacatcgaggtttctgccggtgccactgcgcacgccgcactgcaggcggtcgtt
ttgccgggcacggtgaagtggcagatcggcattcccgacggcacgccggtggggttcagc
gacgcggacctgctgccgcgggcgcacccttccgatgcgcgcatgcactggtctgcggtg
acctacaccgtgggatcgagcagcgtgagcagctttccggcagtgcagtggcgcggcatc
aacaccccgagccggatcgacttcaccctgcccgccaacgaggtgcgcggctatcgcctg
cgtcttttcgtgccgttggcacagggcggcgcacgtccgcagatcagcgtgaacgcacgc
tggaacggcccgctgcctgccgcgcccacgcaaccgaagacacgcggcatcacgcgcggc
actgcgcgcggcaacaataccctttacgaagtggacatccccgcctcggcgttgcaggcc
ggcaacaaccgcatcgagatcggcatcgcctccggctccccggataacggctacctcagc
ccggcaatcgtgttcgacagcatccagctggtggcgttatag
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