Xanthomonas perforans: BJD13_21920
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Entry
BJD13_21920 CDS
T04778
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe00730
Thiamine metabolism
xpe01100
Metabolic pathways
xpe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BJD13_21920
Enzymes [BR:
xpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BJD13_21920
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
APP01419
UniProt:
A0A0G9BUX8
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All DBs
Position
4499827..4501704
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AA seq
625 aa
AA seq
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MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEENP
PLSVYDTSGPYTDPRVAIDLAAGLAPLRAQWIAERGDTVALDGLSSSFGRGREHDVRLDA
VRFPARRLPRVARQGANVTQMHYARRGIITPEMEYVAIRENQRLEAVTDASLRRQHPGQA
FGASIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEE
LTWDIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAQRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDQTLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGISEA
QALSTGMQEKSAQFVAQGAQVYRAT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcccaccgttttgcaacaacaagcccagtcgttgtcggaggctgtcacc
cagccgattcccggttcacgcaagatcttcgtgcaaggctcgcgcgctgatctgcaggtg
ccgatgcgcgagatcgccttgacgcgcacgcccaccttgttcggcggcgaagagaatccg
ccgctcagcgtctacgacacgtccgggccttacaccgatccgcgggtggcgatcgatctg
gcagccggtctggcaccgctgcgtgcgcagtggattgccgagcgtggcgacaccgtcgcc
ctggacgggctgagctccagcttcgggcgtggccgcgagcacgatgtgcgtctggatgca
gtgcgctttccggcgcggcgtctgccgcgggtagcgcgccagggcgccaacgtcacccag
atgcattacgcgcgccgcggcatcatcacgccggaaatggagtacgtggcgatccgcgaa
aaccagcgcctggaagcggtgaccgatgcaagcttgcgcaggcagcacccgggccaggcg
ttcggagcttcgatccagcaacgcattacaccggagttcgtgcgcgaagagatcgcacgg
ggccgcgcgatcttgcccaacaacatcaatcaccccgagagcgagccgatgatcatcggc
cgcaatttcctgaccaagatcaatgccaacatcggcaacagcgcggtgtcttcaggcatt
gccgaagaggtcgagaagctggtgtggtcgatccgctggggcggggacacggtcatggat
ctgtccaccggcaagcacatccatgagacgcgcgagtggatcatccgcaactcgccggtg
ccgatcggcacggtgccgatctatcaggcattggaaaaggtcgatgggcgcgccgaagaa
ctcacctgggacatcttccgcgacaccttgatcgaacaggccgaacagggcgtggattac
ttcaccatccacgccggcgtgttgctgcgttacgtaccgctgaccgcacagcgcgtgacc
ggcatcgtctcgcgtggcggttcgatcatggccaagtggtgcctggcgcatcacaaggag
aattttctctacacgcacttcgaagacatctgccagatcatgaaggcctacgacgtggcg
ttttcgttgggcgatggcctacgccccggctgcatcgccgacgccaacgacgcggcgcaa
ttcggcgagctggaaacgctgggcgagctgaccaagctcgcctggaaacacgatgtgcag
accatgattgaaggccccggccatgtgccgatgcaattgatcaaggaaaacatggacaag
cagctgcgcgaatgcggcgaggcgccgttctacaccctggggccgctgactaccgacatc
gcgccgggctacgaccacatcaccagcgcgatcggtgcggcgatgatcggctggttcggc
accgccatgctctgctacgtcactccgaaagagcacctgggcctgcccaaccggcaggac
gtgcgcgacggcatcatggcctacaagatcgccgcgcatgccgccgacctggccaagggg
catccgggcgcgcaagtgcgcgacaacgccttgagcaaggcgcgtttcgaattccgttgg
gacgaccagttccatcttggcctggatccggaaaaggccaaggagttccatgaccaaacc
ctgcccaaggacgcgcacaagctggcgcacttctgctcgatgtgcgggccacacttctgc
tcgatgaagattacccaggacgtgcgtgattacgcggccgagcacggcataagcgaggcg
caagcgctgtcgacgggcatgcaggaaaagtccgcgcaatttgtcgcgcagggcgcgcag
gtctatcgcgccacgtga
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