Xanthomonas phaseoli: XppCFBP6546_00920
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Entry
XppCFBP6546_00920 CDS
T05156
Symbol
rnd, XppCFBP6546P_00920
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xph
Xanthomonas phaseoli
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xph03016
]
XppCFBP6546_00920 (rnd)
Enzymes [BR:
xph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XppCFBP6546_00920 (rnd)
Transfer RNA biogenesis [BR:
xph03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XppCFBP6546_00920 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Imm75
Motif
Other DBs
NCBI-ProteinID:
ATS28619
UniProt:
A0AB38DUB4
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All DBs
Position
2438594..2439685
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AA seq
363 aa
AA seq
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MPHWITHPSELTDRLQAARPSRIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGM
NAALKEWLIATDIVKVMHSASEDLVTFKCACGALPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLTKGETRSDWMRRPLSPAQLEYAADDVRYLFAIHDKLTRRLAEQNRLEWLAED
ADRLLATVEHDDGERWPHVSLRAAKFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILDNE
LASQLARFPPADLDALLRQFDKFPKAPRKLANAVWDALNTPLPDEEHAPLAQAATDGNKA
LLKRLQDTVAQRSRELGLPDGLLASRRHLETLMEQRSWPAALGQWRRALLEAQLMPLLDN
TAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgccccattggatcacccacccctccgagctgactgaccgcctgcaggcagcgcgacca
tcgcgcatcggcctggataccgaattcattcgcgaacgcacctactggccgcaactggcc
ctggtgcagatggccatcggcgaggagatcctgctgatcgacccgctgatccccggcatg
aacgcggcgctcaaggagtggttgatcgccaccgacatcgtcaaggtgatgcatagcgcc
agcgaagacctggtcacgttcaaatgcgcgtgcggcgcattgccgcggccgttgttcgac
acccagatcgccgcggcgctggccggtgtcggtggcggcatgggctaccagaaactggtc
caggaagtcaccggcaccttgctgaccaagggcgaaacacgctcggactggatgcgtcgc
ccgctgtcgccggcgcagctggaatatgccgccgacgacgtgcgctacctgtttgcgatc
cacgacaagctcacccgccgcctcgccgagcagaaccggctggagtggctggccgaagac
gccgaccgcctgctcgccacggtggagcacgacgatggcgagcgctggccgcatgtgagc
ctgcgcgccgcaaagttcctggaaccggcagcgcaacgccggctgctgcgtctgctgcgt
tggcgggacttgcaggcacggcagagcgatcgcccgcgcagctggatcctggacaacgaa
ctggccagccagctggcgcggtttccgcccgccgatctggacgccttgctgcggcagttc
gataaatttcccaaggcgccgcgcaagctcgccaacgcggtgtgggatgcactcaacacc
ccgcttccggacgaagagcacgcgccgctggcgcaggccgccaccgacggcaacaaggcc
ttactcaagcggctgcaagacacggtggcgcaacgtagccgcgaactcggcttgccggac
ggcctgctggcctcgcgccgccacctggaaaccttgatggaacagcgcagctggcctgcg
gcgctgggccaatggcgccgtgccctgcttgaagcacagctgatgccgctgctggacaat
accgcagcgtag
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