Xanthomonas phaseoli: XppCFBP6546_04810
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Entry
XppCFBP6546_04810 CDS
T05156
Symbol
rnc, XppCFBP6546P_04810
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
XppCFBP6546_04810 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xph03019
]
XppCFBP6546_04810 (rnc)
03009 Ribosome biogenesis [BR:
xph03009
]
XppCFBP6546_04810 (rnc)
03036 Chromosome and associated proteins [BR:
xph03036
]
XppCFBP6546_04810 (rnc)
Enzymes [BR:
xph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
XppCFBP6546_04810 (rnc)
Messenger RNA biogenesis [BR:
xph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XppCFBP6546_04810 (rnc)
Ribosome biogenesis [BR:
xph03009
]
Eukaryotic type
90S particles
RNase
XppCFBP6546_04810 (rnc)
Prokaryotic type
rRNA processing factors
XppCFBP6546_04810 (rnc)
Chromosome and associated proteins [BR:
xph03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
XppCFBP6546_04810 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
ATS29264
LinkDB
All DBs
Position
1575828..1576508
Genome browser
AA seq
226 aa
AA seq
DB search
MSNRTFQRGDPIGHAFADPALLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYQRWP
KADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVA
AIYLDCGFECCRAVVLPWFEASLAALPVGKAEKDPKTRLQEWLQARQLPLPNYALISESG
DEHAKQFHVACILEQPVARAEGRGTSRRLAEQQAATLVIAQLDSNT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaatagaaccttccaacgcggtgatccgatcgggcacgcattcgccgatccggct
ctgctcgcccaggcgctgcggcatcgcagcgccgggacaccgcataacgagcgactggaa
ttcctcggcgacggcatcgtcaacctgctgatcgccgaggcgctgtatcaacggtggccc
aaggccgatgaaggcgcattgacccgtgcacgtgccgaactcgtgcgcgaaggtgcgctg
gccgtgatcggacgtacgttgaatctcggcgagcgcctcacgctgggcccaggcgagttg
aagtccggtggtcaccgacgtgactcgatcctggccgatgcggtcgaagcgatcgtcgcg
gccatctatctggactgcggtttcgagtgttgccgtgcagtggtgctgccgtggttcgaa
gcctcgctggcggcattgccggtgggcaaggcagaaaaggatcccaagacccggctgcag
gaatggctgcaagcgcggcaactgccgctgcccaattacgcgctgatcagcgagagcggc
gacgagcatgccaagcagttccacgtcgcctgcattctggagcagcccgtcgcccgcgcc
gagggccggggcacctcgcgtcgcctcgcagagcaacaggcggcgactcttgtcatcgca
caactggattcaaacacgtga
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