Xanthomonas phaseoli: XppCFBP6546_05905
Help
Entry
XppCFBP6546_05905 CDS
T05156
Symbol
prpR, XppCFBP6546P_05905
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xph
Xanthomonas phaseoli
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xph03000
]
XppCFBP6546_05905 (prpR)
Transcription factors [BR:
xph03000
]
Prokaryotic type
Helix-turn-helix
Other families
XppCFBP6546_05905 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_23
AAA
HTH_17
nSTAND3
HTH_Tnp_ISL3
HTH_28
HTH_Tnp_1_2
ATPase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ATS29431
UniProt:
A0AB34QN96
LinkDB
All DBs
Position
complement(1302855..1304474)
Genome browser
AA seq
539 aa
AA seq
DB search
MKRDNVMRSPVLPETADASLPIIWTVSVSRLTGLLADVIPEFDQRARIEQINLGFAEAVE
VIGQRLRRERCDALVAGGSNAAYLRSRLALPLAPIQATGFDLMEALARARRIAPRIGVVT
HATDVPSFRAFQHSFDLEIEHRRFVTAEDARHCIADLRASGIQVIVGTGMAIDFAEQAGL
PGVLLYSADSVRHALEQAITLGGAPGTDRVAGRTAPRRARRADALLGEDSAMRGVRDLVQ
LYAPHAGTVLISGETGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYSDGA
FTGARRGGHTGLIEAAQDGTLFLDEIGELPMPLQTRLLRVLEEREVLRVGATVPVAIDVR
VVAASLQELQQLVEQGRFRRDLFYRLAALRIALPSLRHRHRDIALLLAHFFQQLGSMPSP
LSPAALQCLQHHSWPGNVRELRNLVERLCIHWKAKPHDSLSLEQLGRWAPELFDTPPDNR
GAPLEHADLATSRLQLTASAVRAALDRANGNRTLAAQALGVSRTTLWRWMQAQAVASRT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgacaacgtcatgcgcagccctgtcctcccggaaaccgcagacgcctccttg
cccatcatctggaccgtcagcgtctcgcgcctgaccggcctgctggccgatgtcattccc
gagttcgaccagcgcgcgcgcatcgagcagatcaacctcggctttgccgaagcggtcgag
gtcatcggccagcgcctgcgccgcgagcgctgcgacgcgctggtggccggcggatccaat
gcggcgtacctgcgcagccggctcgcgctgcccttggcacccatccaggccaccgggttc
gatctgatggaagcgctggcgcgtgcgcgccgcattgcgccacgcatcggcgtggtcacc
cacgccaccgatgtgccgtcgttccgcgcgtttcagcacagcttcgatctggaaatcgaa
caccgccgtttcgtcaccgccgaagacgcacgccactgcatcgccgatctgcgcgccagc
ggcatccaggtcattgtcgggaccggcatggcgatcgatttcgccgagcaggccgggctg
cctggcgtgctgctgtattcggccgattcggtgcgtcacgcgctggaacaggccatcacg
ctgggcggcgccccaggcaccgatcgcgtcgccggccgtaccgctcctcgccgcgcgcga
cgcgccgacgccctgctgggcgaagacagcgcaatgcggggcgtgcgcgatctggtgcag
ctctacgcaccgcatgccggcaccgtgttgatcagcggcgaaaccggcaccggcaaggaa
ctggtcgcgcgacaactgcatgccggcagtcgtcgccgcggccgtttcgtggcgatcaac
tgtggcgccatcagcgaatcgttgctggaggcggaactgttcggctacagcgacggcgcc
tttaccggtgcccgtcgcggcggccacaccggtctgatcgaagctgcgcaggacggcacg
ctgtttctcgacgaaatcggcgaattgccgatgccgttgcagacccggctactacgcgtc
ctggaagaacgtgaagtgctgcgtgtcggcgcaaccgtgcccgttgcgatcgacgtgcgc
gtggttgccgccagcctgcaggaactgcagcagttggtcgaacagggccgcttccgccgc
gacctgttctatcgccttgccgcgctgcgcattgcactaccgtcgctacgacaccgccac
cgcgacattgccttattgcttgcgcattttttccagcaactcggcagcatgccatcgccg
ctatcgccagctgcactgcaatgcctgcaacaccacagctggcccggcaatgtgcgcgag
ctgcgcaatttggtggaacggctatgcattcactggaaagccaaaccgcacgacagcctg
agtttggagcaactcggacgctgggcgccggaattattcgatactcctcccgacaaccgc
ggcgcaccgcttgagcatgccgatttggcgacttctcgcctgcagctcaccgccagcgca
gtccgcgcagcgctcgaccgcgccaacggcaaccgtaccctcgccgcgcaagcgctcggc
gtctcgcgcaccacgctgtggcgctggatgcaggcgcaggcggtggcgtcgcgtacatag
DBGET
integrated database retrieval system
