Xanthomonas phaseoli: XppCFBP6546_06040
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Entry
XppCFBP6546_06040 CDS
T05156
Symbol
dnaX, XppCFBP6546P_06040
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph03030
DNA replication
xph03430
Mismatch repair
xph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XppCFBP6546_06040 (dnaX)
03430 Mismatch repair
XppCFBP6546_06040 (dnaX)
03440 Homologous recombination
XppCFBP6546_06040 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xph03032
]
XppCFBP6546_06040 (dnaX)
03400 DNA repair and recombination proteins [BR:
xph03400
]
XppCFBP6546_06040 (dnaX)
Enzymes [BR:
xph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XppCFBP6546_06040 (dnaX)
DNA replication proteins [BR:
xph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XppCFBP6546_06040 (dnaX)
DNA repair and recombination proteins [BR:
xph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XppCFBP6546_06040 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
ResIII
AAA_18
PIF1
AAA_7
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_2
AAA_24
SKI
Motif
Other DBs
NCBI-ProteinID:
ATS29454
UniProt:
A0AB38E160
LinkDB
All DBs
Position
1279296..1281377
Genome browser
AA seq
693 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLLQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSQRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGASAGGGARSTAAGGQAAAPAAVAPVTAAPAVVSAPAAVTATMPAAAVE
ASLPASATQATPTPAAAPVVVLPSQAPPPAGRTSAANARNDDTPPWAVDDAPVRAQAAPA
HDTMAVLAPEAAMAPPSAPAELAQPDAIASDAAVEAPASLVVSLPVALVDPSSFEEPALV
APPTTAAPASDSATDATALLDDGRIADAEQWLELVTRSGLNGPSRQLAANAAFIGHRDGV
LRLALAPGFEYLHSERSIANLAQALAPVLGNPPRIVIETGSADVETLHERANRQKGERQS
AAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgtgtgcatcacgcg
ttcctgttcaccggcacccgtggcgtgggcaagaccaccattgcgcgcattttcgccaaa
tcgctcaattgcgagaccggcaccagtgccgatccgtgcgggacgtgcccggcctgcctg
gacatcgacgccgggcgctacatcgacctgttggagatcgatgccgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtctacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaatgcgctgctg
aagacgttggaagagccgcccgagcacgtgaagttcctgctggccaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcgcctggacgaa
gaccagatccagggccagatgacccgcatcctggccgccgagcagatcgaatcggacccg
tcggcgatcgtgcagctgtccaaggcggccgacggctcgctgcgcgatggcctgtcgctg
ctggaccaggccatcgcctacgccggcggtgcgctgcgcgaggatgtggtgcgcacaatg
ctgggcacggtggaccgcacccaggtcggcgcgatgctgcagtcgttggccgatggcgat
ggcgcgcgcctgttgcaggtggtggccgcgctggccgaattttcgcccgattggagcggc
gtgctggaggccctggccgaggcattgcaccgggtgcaggtgcagcagctggtgccgtcg
gtggcctttgtcggcgacggcatcgacccgacgccgtttgcggcgcagctgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcggcgcgacctgtatctggcgccc
agccaacgcgccggtttcgaaatggcagtactgcgcatgcttgccttccgccccgcagcg
gcggtgcccgctggcggctcggatgacgggcgcggagccagcgcaggcggtggcgcgcgt
tcgaccgctgccggcggccaggctgctgcgccggcagcggtagcgccggtgacggctgcg
cccgccgtagtgtccgcgcctgctgcggtgaccgccacgatgcccgctgcggcagtggag
gcgtccttgccggcatcagcgacccaggcaaccccgactccggctgcggctcccgtcgtc
gtgcttccctctcaagcgcctcctccggccggccgcacgtcggcagccaatgcgcgtaat
gacgacacgccgccgtgggccgtggacgatgcaccggtgcgggcgcaggccgcgccggcg
cacgacaccatggccgtgcttgcgcccgaagcggcgatggctccgccgtctgcgcccgcc
gagctcgcgcagcccgatgcgattgcgtctgacgctgcggtggaagctccggcttcgctt
gtcgtgtcattgccggtcgcgctggtcgatccctcatcgtttgaagagccagcgctggtt
gcgccacccacaacggccgcgcccgcatcggactcggcaaccgacgcgacggccctgctc
gatgacggccgcatcgccgatgccgagcaatggctggagctggtcacgcgcagtggcttg
aatggcccgtcgcgccagttggccgccaacgccgcctttatcggccatcgcgatggcgtg
ctgcggctggcgctggcgccgggcttcgaatatctccactccgagcgctccatcgccaac
cttgcgcaggcgctggcaccggtgttgggaaatccgccgcgcatcgtcatcgaaaccggt
agtgccgatgtcgaaaccttgcacgagcgtgccaaccggcagaaaggcgagcgccagagc
gcggccgaaacagccttcatgaacgacccgacggtgcagttgctgatccagcagcaaggc
gcgcgtatcgtgcccgattccatccgcccttacgacgagtaa
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