Xanthomonas phaseoli: XppCFBP6546_06160
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Entry
XppCFBP6546_06160 CDS
T05156
Symbol
XppCFBP6546P_06160
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
xph
Xanthomonas phaseoli
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xph03032
]
XppCFBP6546_06160 (XppCFBP6546P_06160)
03036 Chromosome and associated proteins [BR:
xph03036
]
XppCFBP6546_06160 (XppCFBP6546P_06160)
03400 DNA repair and recombination proteins [BR:
xph03400
]
XppCFBP6546_06160 (XppCFBP6546P_06160)
DNA replication proteins [BR:
xph03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XppCFBP6546_06160 (XppCFBP6546P_06160)
Chromosome and associated proteins [BR:
xph03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XppCFBP6546_06160 (XppCFBP6546P_06160)
DNA repair and recombination proteins [BR:
xph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XppCFBP6546_06160 (XppCFBP6546P_06160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Lmo2446-like_N
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ATS29469
LinkDB
All DBs
Position
1263788..1264060
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDGVAAAADISKAEAGRAVDAVVSEITKALKKGDAVTLVGFGTFQVRERAERTG
RNPKTGDSIKIAASKNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgatcgatggcgttgccgctgccgctgacatctccaaggctgaa
gctggccgtgctgttgacgcggttgtgagcgaaatcaccaaggcactgaagaagggcgac
gccgtcaccctcgttggcttcggtaccttccaggtccgtgagcgcgccgagcgcaccggc
cgcaatccgaagaccggcgacagcatcaagatcgctgcttcgaagaatcctgcattcaag
gctggtaaagccctgaaggatgcagtaaactaa
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