Xanthomonas phaseoli: XppCFBP6546_08350
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Entry
XppCFBP6546_08350 CDS
T05156
Symbol
XppCFBP6546P_08350
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xph
Xanthomonas phaseoli
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xph03000
]
XppCFBP6546_08350 (XppCFBP6546P_08350)
Transcription factors [BR:
xph03000
]
Prokaryotic type
Helix-turn-helix
Other families
XppCFBP6546_08350 (XppCFBP6546P_08350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
HTH_23
AAA_5
HTH_30
HTH_7
PAS
AAA_2
HTH_20
HTH_28
MCM
PAS_4
PAS_9
HTH_22
HTH_17
AAA
HTH_AraC
PAS_8
HTH_50
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ATS29829
UniProt:
A0AB34QLC6
LinkDB
All DBs
Position
complement(777502..779478)
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AA seq
658 aa
AA seq
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MSEVTVANLLQATAGPTSAAEAESALLVRMRRFRQIEPLPPALARSWQRCLDEYGLSPDA
APLPMVHDGSGLRERQQRLEEVLRIAKVEMENLYEQIAGGGYAVVFADAEATLLHSVQDP
ALLREFRQTGLFCGASWAERYQGTNGIGTCAVERSALGVHRGEHYLARHLPLSCSGAPIL
DPHGQLLAVLDASTPDARDTKLVQRHTSALVRMSAAQIARSYFLEQYRHAWILRFHSRPE
FAGLLHEALMAIDNDGCVLAVNEAALEQLGKGDRSLLVGRDISQVMQLDFDTVEQRARNA
ASTLWSIRCACHGRRFFALAQPPRRNVVAGGAHATPAGEGEAAYAREHVGSDPRMRHNLD
NALKLVAHRVSILLCGATGTGKEEFAKAVHRGSPWAARPFVAVNCAAIPEALIESELFGY
ARGAFTDAAREGRHGKLLQASGGTLFLDEIGDMPLPLQTRLLRVLEEQSVTPLGSDRAMP
LELHVISASHRDLAQMVAAGEFREDLYYRLNGVVLHLPPLRERSDKAELIRTLLREENSE
RSVRISEDALHKLLSYAWPGNLRQLRNVLRTAAVLCSDEVIRLPNLPQEIVDAGSAPCLV
DARAVAADDMPGRVALDQAERLVLQQQLERHRWNVSRTADALGISRNTLYRKLRKHGL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggaagtgactgtcgccaacctcctgcaggccacggccgggcccacgtccgctgcc
gaggccgagtccgcgctgctggtgcggatgcgccgcttccgccagatcgaaccactgccg
ccggcgctggcgcgctcgtggcagcgctgcctggacgagtatgggctgagtccggatgct
gccccgttgccgatggtccacgatggcagcgggctgcgcgagcgccagcagcggctggaa
gaagtgctgcgcatcgccaaggtggagatggagaacctctacgagcagatcgctggcggc
ggctacgccgtggtgttcgccgacgccgaggcgaccttgctgcacagcgtgcaggatccg
gcactgttgcgcgaattccgccagaccgggttgttctgcggcgccagctgggccgagcgc
taccagggcaccaacgggatcggcacctgcgcggtagagcgcagcgcgctcggcgtgcac
cgcggcgagcattacctggcacggcacctgccgctgtcgtgcagcggtgcgccaatcctc
gacccgcacgggcaattgctggcggtgctggatgcgtccacgccggacgcgcgcgacacc
aagctggtacagcgccacaccagcgcgttggtgcgcatgtcggcggcacagatcgcgcgt
tcgtatttcctggagcagtaccggcatgcgtggatcctgcgcttccacagccgcccggag
ttcgccggcctgctgcacgaggcgctgatggcgatcgacaacgacggctgcgtgctggcc
gtcaacgaagcggcgctggaacagctcggcaagggcgatcgcagcctgctggtcgggcgc
gacatctcgcaggtgatgcagctggacttcgacaccgtggagcagcgtgcgcgcaatgct
gccagcacgctctggtcgatccgctgtgcctgccacggacgccgcttcttcgccctggcg
cagccgccgcgccgcaacgtggttgctggcggcgcgcacgccactcccgccggcgaaggc
gaggcggcttacgcacgcgaacacgtcggctccgatccgcgcatgcgccacaacctggac
aacgcgctgaagctggtcgcgcatcgcgtgtcgatcctgctgtgcggcgccaccggcacc
ggcaaggaggagttcgccaaggcggttcaccgcggctcgccctgggcggcgcggccgttc
gtggcggtgaactgtgcggcgatccccgaggcgctgatcgagagcgaactgttcggctac
gcgcgcggcgcgttcaccgatgctgcgcgcgaaggccgccacggcaagctgctgcaggcc
agcggcggcaccttattcctggacgagatcggcgacatgccgctgccgctgcagacgcga
ctgctgcgcgtgctcgaagaacagagcgtgaccccgctgggcagcgaccgggcgatgccg
ttggaactgcacgtgatcagcgccagccaccgcgacctggcgcagatggtggccgccggc
gaattccgcgaggacctgtactaccgcctcaacggtgtggtgctgcacctgccgccgcta
cgcgaacgcagcgacaaggccgagctgatccgcaccctgctgcgcgaggaaaacagcgag
cgcagcgtgcgcatcagcgaagatgcgctgcacaagctgctcagctacgcctggccgggt
aacctgcgccaattgcgcaatgtgctgcgcacggcggccgtgctgtgcagtgacgaggtg
attcgtctgccgaatcttccacaggagatcgtcgacgcgggcagcgcaccttgcctggtc
gatgcgcgtgcggtcgcggccgacgatatgcccggccgcgttgcattggatcaggccgag
cggctggtgctgcagcaacaactcgaacgccaccgctggaatgtcagccgcaccgccgac
gccctgggcatcagccgtaacaccctgtatcgcaagttgcgcaagcacgggctgtag
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