Xanthomonas phaseoli: XppCFBP6546_12085
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Entry
XppCFBP6546_12085 CDS
T05156
Symbol
XppCFBP6546P_12085
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XppCFBP6546_12085 (XppCFBP6546P_12085)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xph03400
]
XppCFBP6546_12085 (XppCFBP6546P_12085)
Enzymes [BR:
xph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XppCFBP6546_12085 (XppCFBP6546P_12085)
DNA repair and recombination proteins [BR:
xph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XppCFBP6546_12085 (XppCFBP6546P_12085)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
AAA_22
UvrD_C
T2SSE
nSTAND3
AAA_16
DEAD
SLFN-g3_helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QTJ31720
LinkDB
All DBs
Position
complement(4994726..4997233)
Genome browser
AA seq
835 aa
AA seq
DB search
MTPPNLFAALNQSGALRTLDLAFAQSLQRLEPDTDPQVLAGAALASLAVTSGHAGLDPAR
AAMVLDARDGPPPTFPDPADWQRSLAASRWVDQPQPEAPAAADCPLVLERGLLYLRRYRE
YERRLALGLQRIAAQAPPPVDAATLAPLFAQLFPNATATPRSAAPTPLPPAEGARRAGEG
SALPAPSLQQEGTNPPAPSITGANQAAPARSPDRQAQAAALALRRMLLLVTGGPGTGKTT
TIARMLLLRIAQARTAGTSPPRIALAAPTGRAAERMAESLRLAVARAMEQGLPPPPATPT
PETSPLPPTAPDQDAFPLPPAGEGGRRAGEGSAPTDLPSTAPHPDAFPLPLAGEGARRAG
EGSALIDPHGNSALPSGASTLHRLLGVIPDSPHFHHNADNPLPFDLIVVDEASMVDLPLM
CKLVEAVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQPEDAQALQPLLGSAP
VDPPAVTSATRSGGLAGHRVHLLRGYRQAEDFALAPLADAIRAGDADTALALLGSGELPG
VYFHEDGEDPLTLGRDALLAHWRALANAQDPAAALRDAARLRLLTAVRAGPQGARGLNAR
IEQLLADTGAGARRLGGASPWFQGRLLLITENSYRHGLFNGDVGICLRSDPGALPGRSDA
RPAPGQGDASAVTTRGHAPPSPRPGHAGDRVHHDAPATDSRAQGPLVAWFEGDGDGQVRG
FHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPTRDARVLSRELLYTGLTRARRALHLAG
SEAVMRAALARHAARISGLAWRLGAKDDKPPPVPAPTPAPLPQPPPSAPVQGALF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacccccccaaacctgttcgccgccctcaaccagagcggcgccctgcgcaccctggat
ctggccttcgcgcaaagcctgcaacgcctggaaccggacaccgatccacaggtgctggcc
ggcgctgcgctcgcctcgctggcggtcaccagcggccacgccgggctggaccccgcccgc
gccgccatggtgctggacgcgcgcgacggcccgccgccgaccttcccggaccccgccgac
tggcaacgcagcctggccgcctcgcgctgggtcgaccaaccgcagcccgaggccccggcc
gccgccgattgcccgctcgtcctcgaacgcggcctgctctacctgcgccgctatcgcgag
tacgaacgccgcctggccctgggcctgcaacgcatcgccgcgcaagcgccgccgccggtc
gacgccgccacgctggcgccgctgttcgcgcagttgttcccgaacgccaccgcaacgcct
cgcagcgcggccccaacccctctccccccggcagagggcgcccgcagggcgggtgagggg
tcggccctgcccgcgccctccctccagcaagagggcacaaatccgcctgcgccgtccatc
acgggggcgaaccaggcagcgccagcccgcagccccgaccgccaagcccaggccgcggcc
ctcgcgctgcgccgcatgctgctgctggtcaccggcggccccggcaccggcaagaccacc
accatcgcccgcatgctgctgctgcgcatcgcccaggcccggaccgccggcacatcgccg
ccgcgcattgccctggccgcgcccaccggccgcgccgccgagcgcatggccgagagcctg
cgcctggccgtggcccgcgccatggagcaagggctgccgcctccccccgccacaccgacc
ccggagacgtcccccctcccacctaccgcaccggaccaagacgctttccctctcccgcct
gcgggagagggcggccgcagggcgggtgagggcagtgcgcccaccgatctcccgtccacc
gcaccgcacccagacgctttccctctcccgcttgcgggagagggtgcccgcagggcgggt
gagggcagtgcgctcatcgacccgcacgggaactccgccctgcccagcggcgccagcacc
ctacatcgtctgctcggcgtcatcccggattccccgcacttccaccacaatgccgacaac
ccgctgccgttcgacctgatcgtggtcgacgaagcgtccatggtcgacctgccgctgatg
tgcaaactggtcgaagccgtcgccgatggcacccagctgatcctgctcggcgatgccgac
cagctgccttcggtggaagccggcgatgtgctggccgccatcctgcaggccgccggcccg
ggcgatgccctgcagccagaggatgcccaggccctgcaaccgctgctcggcagcgcgcct
gtcgatccgcctgcggtcacctccgccacccgcagcggcggcctggccggccaccgcgtg
cacctgctgcgcggctatcgccaggccgaggatttcgcactggcgccactggccgacgcc
atccgcgccggcgatgccgacaccgccttggccctgctaggcagcggcgaactgcccggc
gtgtacttccacgaagacggcgaagacccgctgacactcggccgcgatgcgctgctcgcc
cactggcgcgcgctggccaacgcgcaagaccccgccgccgccctgcgcgatgccgcccgc
ctgcgcctgctcaccgcggtgcgcgccggcccgcaaggcgcgcgcggcctcaacgcccgc
atcgaacaactgctggccgacaccggcgccggcgcccgtcgtctgggcggcgcctcgccc
tggttccagggccgcctgctcctgatcaccgaaaacagctaccgccacggcctgttcaac
ggcgacgtcggtatctgcctgcgcagcgacccgggcgccttgcctggccgcagcgacgcg
cgcccggcccccgggcagggcgatgcaagtgccgtgaccacgcgtggccacgcgccaccg
tcgccaaggccgggccacgccggcgaccgcgtacaccatgacgcccccgccaccgacagc
cgtgcccaaggccccttggtcgcctggttcgaaggcgacggcgacggccaggtgcgcggc
ttccatcccgccgcacttcccgcgcacgaaagcgccttcgccatgaccgtgcacaaggcc
caaggcagcgaattcgacgaggtctggctgcaactgcccacccgcgacgcccgcgtactc
agccgcgaactgctctacaccggcctcacccgcgcccgccgcgccctgcacctggccggc
agcgaagcggtcatgcgcgccgcgctggcgcggcacgccgcacgcatctcggggttggcg
tggcgcttgggtgcaaaagacgacaagccaccgccagttccagcacccacgccagcgccg
cttccacaaccgccgcctagtgcgcctgtgcaaggtgcgctgttctga
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