Xanthomonas phaseoli: XppCFBP6546_12870
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Entry
XppCFBP6546_12870 CDS
T05156
Symbol
XppCFBP6546P_12870
Name
(GenBank) STM4012 family radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph00860
Porphyrin metabolism
xph01100
Metabolic pathways
xph01110
Biosynthesis of secondary metabolites
xph01240
Biosynthesis of cofactors
Module
xph_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
XppCFBP6546_12870 (XppCFBP6546P_12870)
Enzymes [BR:
xph01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
XppCFBP6546_12870 (XppCFBP6546P_12870)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ATS30524
UniProt:
A0AB34QJD0
LinkDB
All DBs
Position
complement(4827246..4828607)
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AA seq
453 aa
AA seq
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MSLPSLADLLRLPPYQAYSYSYPHKTSYRPLQPAVPLSQVWADERRQALFLYLHIPFCSY
RCGFCNLFALARPAPAQVEAYLAQMEQQLRATVQALGAHRFVRFAMGGGTPSYLDAGQLQ
RVFDMVARHATIAMDTIPAGIEVSPETVDAEKLQVLRQAGIDRVSMGIQSFSAAEVSALV
RPQQRETVERAIDIIRAHDIPTLNLDLIYGIAGQTVESFLASIDSALAFAPEELYLYPLY
VRPMTGLGRIEAKAGGRRSFVLQPEPLDERLALYRAGRDRLLAAGYTQISMRMFRAPHAP
DGDAPVYCCQSDGMVGIGCGARSYTAGLHYSSEYGVSRRSVADILEHYLQRDPASFARAD
YGIALDADDARRRHAIQSLLVVPGLDRDDFRQRFGMDCLDALPQLQELLALGLAQWQGSL
LSLTAAGMERADTVGPWLTSAPIVERMQQYQVG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgccgtcgttggccgatctgctgcgcttgccgccgtatcaggcgtattcgtat
tcgtacccgcataaaaccagttatcggccgttgcagccggcggtgccgttgtcgcaggtg
tgggccgacgagcgccggcaggcgctgttcctgtatctgcacatcccgttctgttcctat
cgttgcgggttctgcaatctgtttgcgctggcacggccagcgccggcgcaggtggaggcg
tatctggcgcagatggagcagcaattgcgcgccaccgtgcaggcgctgggcgcgcaccgt
ttcgtgcgctttgccatgggcggcggcacgccaagctatctggatgcggggcagttgcag
cgggtgttcgacatggtggcgcgtcacgcgacgatcgcgatggataccatcccggccggg
atcgaggtctcgccggaaaccgtcgatgccgagaagctgcaggtgttgcggcaggccggg
atcgaccgcgtcagcatgggcatccagagtttcagtgccgccgaggtgagcgcgctggtg
cggccgcagcagcgcgagacggtggaacgtgcgatcgacatcattcgcgcccacgacatc
ccgacgctgaacctggatctgatctacggcatcgccgggcagaccgtggaaagcttcctg
gcctcgatcgacagcgccttggccttcgcgccggaagagctgtacctgtacccgctgtac
gtgcggccaatgaccgggttgggccggatcgaggccaaggccggcgggcgacgcagcttc
gtgctgcagcccgaaccactggacgaacgcctggcgttgtaccgggccgggcgcgaccgg
ctgctggcagccggctacacccagatctcgatgcgcatgttccgcgccccgcatgcaccc
gatggcgacgcgcctgtgtactgctgccagagcgatggcatggtcggcatcggctgcggt
gcgcgctcgtataccgccgggctgcattactccagcgaatacggggtgagccggcgctcg
gtggcggatatactcgaacactatctgcagcgcgacccggccagctttgcacgcgccgac
tacggcattgcgctggacgccgacgatgcgcggcggcggcatgcgatccagtcgctgctg
gtggtgccagggctggatcgcgatgacttccgccagcgtttcggcatggactgcctggat
gccttgccgcagctgcaggagttgctggcgctggggctggcgcagtggcagggcagcctg
ctgtcgctcaccgccgccggcatggagcgcgccgataccgttggcccgtggctgacctcg
gcgccgatcgtcgagcgcatgcagcagtaccaggtcgggtag
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