Xanthomonas phaseoli: XppCFBP6546_13650
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Entry
XppCFBP6546_13650 CDS
T05156
Symbol
uvrD, XppCFBP6546P_13650
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph03420
Nucleotide excision repair
xph03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XppCFBP6546_13650 (uvrD)
03430 Mismatch repair
XppCFBP6546_13650 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xph03400
]
XppCFBP6546_13650 (uvrD)
Enzymes [BR:
xph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XppCFBP6546_13650 (uvrD)
DNA repair and recombination proteins [BR:
xph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XppCFBP6546_13650 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XppCFBP6546_13650 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
QTJ31690
LinkDB
All DBs
Position
complement(4637280..4639466)
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQALELDESKYPPKQLSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARASALSLWEAAMLCTQQNTLAARARNALATFLSLIGQLHAETGQMELAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTAS
LGAARGGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattacctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggcgtgcccaaccacggcatcttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgtcaccgcaccgacctgcagctgcgcaat
ggcagccgcgggatgtggatcggtacatttcacgggctggcccatcgcctgttgcgtctg
cattggcaggacgcgcggctaccggaaggtttccaggtcatggacagcgacgaccagttg
cggctggtcaagcgcgtggtgcaggcgctggagctggacgagagcaagtatccgcccaag
caactgagctggtggatcaacgagcagaaggacgagggccgccgtccgcaacatatccag
cctgagcccaacgacgattggaccgaggtgcgccggcaggtgtatgcggcctaccaggaa
cgctgcgaccgctccgggctgctggatttcgccgagttgctgctgcgcgcacacgagttg
ctgcgcgacacgcccgcattgctggcgcattaccgcgcacgcttccgcgagattctggtg
gacgagttccaggacaccaacgccatccagtatgccttcgtgcgggtgctggccggcgaa
tcgggcaacgtgttcgtggtgggcgacgacgaccaggccatctatggctggcgcggtgcc
aaggtcgagaatgtccagcgtttcctgaaggatttccctggcgcgcagaccgtgcggctg
gagcagaactaccgctccagcgccaatatcctgggcgctgccaatgcagtgatcgcgcac
aacccggaccgtatcggcaaacagttgtggaccgattccggcgatggcgacccgatcgat
ctgtatgcggcatacaacgaagtggacgaagcgcgctatgtggtcgagcgtgcacggcag
tgggtgcgcgacggcggcagttatggcgaagtggcggtgctctaccgcagcaacgcgcaa
tcgcgcgcgctggaagaggcgctgatttccgagcagttgccgtaccgtgtgtatggcggc
atgcgctttttcgaacgtgccgaaatcaaggacgcgttggcttacctgcgcctgctgacc
aatcgcagcgacgacgctgcgttcgaacgcgcggtcaacacgcccacgcgcggcattggc
gaccggacgctggatgaggtgcgccggctggcacgtgccagtgcgctgtcgttgtgggaa
gcggcgatgctgtgtacgcagcagaacacgctggccgcacgcgcacgcaatgcgctggcc
accttcctcagcctgatcggccagctgcatgccgaaaccgggcagatggaactggccgaa
cgcatcgaccatgtgctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgt
ggcgggctggattcggaatcgcgtaccgagaacctggacgaactggtgtcggtcgcctcg
cgcttcacccgccccgacgacgaagacagccagggcatgaccgaactggtcgccttcctg
gcctatgcctcgctggaggccggcgaaggccaggcgcaggctggcgaagaaggcgtgcag
ctgatgacgctgcattcggccaagggactggaatttccgatcgtgttcctggtcggtctg
gaagacggtctgttcccgagcgcgcgctcgttggaagaaagtgggcggctggaagaggaa
cggcgtctggcgtacgtgggcatcacccgcgcgcggcaaaagctggtgctgtgctacgcc
gaatcgcgtcgcatccatggccaggacaactacaacgtgccctcgcgcttcctgcgcgag
attccgcgcgacctgctcaacgaagtgcgcccgaaggtgcaggtttcgcgcaccgcatcg
ctgggcgcggcgcgcggtggcccggtccatggcatcgtggagaccgcgccgatcaagctc
ggcgccaacgtcgaacatcccaagttcggcggcggcgtggtggtcgattacgaaggcgcc
ggtgcgcatgcgcgcgtgcaggtgcagttcgacgaggtcggcgccaagtggctggtgatg
gcctacgccaatctgaccgtggtgtag
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integrated database retrieval system
