Xanthomonas phaseoli: XppCFBP6546_15260
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Entry
XppCFBP6546_15260 CDS
T05156
Symbol
rpoH, XppCFBP6546P_15260
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xph
Xanthomonas phaseoli
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xph03021
]
XppCFBP6546_15260 (rpoH)
Transcription machinery [BR:
xph03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XppCFBP6546_15260 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
HTH_11
KORA
HTH_10
UCR_14kD
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ATS30895
LinkDB
All DBs
Position
complement(4282308..4283183)
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AA seq
291 aa
AA seq
DB search
MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQDLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMAGLD
ARSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagactacctcgactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgag
gagcaggatctggcccgtcgcttccgcgacgagctggacctggacgccgcgcgcgagctg
gtccattcccacctgcgcttcgtggtgcatgtggcccgcggctacaacggctatggcctg
ccgctgggcgacctgatccaggaaggcaatatcggcctgatgaaggcggtcaagcgcttc
gacccggacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgaaatg
cacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtccaagacccgcctgggctggctcaatgcgtcggaa
gtgacggcggttgccaaggacctgaacgtctccgaacgtgaagtgatggagatggagtcg
cgtctgtccggccgcgatatcgggttcgacgcgtcgtcggacgaagacgacgaccacggc
ccgccgtcgccggtgagctacctggtcgccaacgaggaagacccctcgcaggcgtacgag
cgtcacgacagcgaagacaatcagctgcagctgctgcgcgaaggcatggcgggcctggac
gcgcgttcgcgcgacatcgtcaagcgccgttggctggattccgattccaaggtgacgttg
caggaactggcagacgaatacggcgtgtcggccgagcgcatccgccagatcgaagcgaat
gcgctgaagaagatgaaggcgctgttcgtcgcctga
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