Xanthomonas phaseoli: XppCFBP6546_15290
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Entry
XppCFBP6546_15290 CDS
T05156
Symbol
XppCFBP6546P_15290
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XppCFBP6546_15290 (XppCFBP6546P_15290)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xph03400
]
XppCFBP6546_15290 (XppCFBP6546P_15290)
Enzymes [BR:
xph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XppCFBP6546_15290 (XppCFBP6546P_15290)
DNA repair and recombination proteins [BR:
xph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XppCFBP6546_15290 (XppCFBP6546P_15290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
SH3_16
AAA_19
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
ATS30900
UniProt:
A0AB38E499
LinkDB
All DBs
Position
4275374..4277596
Genome browser
AA seq
740 aa
AA seq
DB search
MPSTVATLRVALPVPLPQLFDYLPPTDAPLTDPARVGCRVRVPFGPRELVGVVVEIRQLP
AADGLRPALAWCDQAPLLVDELARSLHWLARYTHAPLGEAQASALPGPLRRGEPLADTHA
WAWQLTEAGRSGAASLRAGSRPALLAALLLTGAVGEGQLDPLLPQWRQAAHSLAKRNYAQ
RVAVPADAIPPRPGSGPPLNDEQQAAAAAVRAHSGFATYLLDGVTGSGKTEVYLQAIADC
LAAGKQALVLVPEIGLTPQTLGRFRSRLGVPVHALHSGLSDGERARVWAAAWRGEAKLIV
GTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSATPSL
ESLHNAYSGRYQHLRLSRRAGDARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARGEQV
LVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQPAPLAC
PACASLALQPQGIGTERLEERLTEAFPDFPVVRIDRSTTQRRDALETQLARLGTEAGILV
GTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLAQQLIQVAGRAGRADRPGEVWLQ
THHPEHPLLQTLVNGGYHAFADAELQQREAAGFPPFAHLALFRAEAKDVAAANQFLLAVR
SLTSAEPGTQSPAFAAVECYGPMPAPMPRRAGFQRTQLLLSAQQRAALHRLLDTQLPAIY
ALPQARRVRWSLDVDPIDLY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgaccgtcgccaccctgcgcgtcgccttgccggtgccgctgccccagttgttc
gactatctgcctccgaccgatgcgccgttgaccgacccggcgcgggtcggctgccgggtg
cgggtgccgttcgggccacgcgagttggtcggggtcgtggtggagatcaggcaactgccc
gcggccgacggcttgcgcccggcactggcgtggtgcgaccaggccccgctgctggtcgat
gaactggcgcgctcgctgcactggctggcccgctacacccacgccccgctcggcgaggcc
caggccagcgccctgcccggcccgctgcgccgcggcgaaccgctggccgacacccacgcc
tgggcctggcagctgaccgaagccggtcgcagcggtgccgccagcctgcgtgcgggcagc
cgccccgccctgctggcggccttgctgctgaccggcgcagtgggcgaagggcagttggac
ccgctgctgccgcagtggcggcaggccgcgcacagcctggccaaacgcaactacgcccag
cgcgtggcagtgccggccgacgccatcccgccgcgccccggcagcggcccgccgctcaac
gacgaacagcaggcggccgccgccgcagtccgcgcgcacagcggctttgccacctacctg
ctcgacggcgtcaccggcagcggcaagaccgaggtctacctgcaagcgatcgccgattgc
ctggctgccggcaagcaggcgttggtgctggtgccggagatcggcctgaccccgcagacc
ctgggccgcttccgtagccgtctgggcgtgccggtgcacgcgctgcactcgggcctgtcc
gatggcgaacgcgcccgggtatgggcggcggcctggcgcggcgaggccaagctgatcgtc
ggcacccgctcggcggtgttcaccccgctgcccaacgccggcctgatcgtgatcgacgaa
gagcacgacggcagctacaagcagcaggacggcatccgctatcacgcgcgcgatttcgcc
ctggtacgcggcaaggcgctggatgtgccggtgatcctgggcagcgccacgccctcgctg
gaaagcctgcacaacgcctattccggccgctaccagcatctgcgtctgtcgcggcgcgcc
ggcgacgcgcgtccgccgcgcgtgcgggtgctcgacgtgcgcaagcgcccgctcaaggac
ggcctgtcgcccgaggtgctggccggtatcggcgccaccctggcgcgtggcgaacaggtc
ctggtgttcaagaaccgccgcggctatgcaccggtgctgctgtgccacgactgcggctgg
accgccgcctgccagcgctgcagcacgccgctgcaccagacgccgatgaccgtgcatgcc
ggcggccgccgcctgcagtgccaccactgcggcgcgcgccaacccgcaccgctggcctgc
ccggcctgcgccagcctagcgctgcagccgcagggcatcggcaccgagcggctggaagag
cgcctgaccgaggcgtttccggatttcccggtggtacgcatcgaccgcagcaccacccag
cgccgcgacgcactggaaacccagctcgcccggctcggcaccgaggccggcatcctggtg
ggcacgcagatcctggccaagggccacgacctgccgcggctgaccatggtggtggtggtc
ggcatcgacgaaggcctgttttcggccgacttccgcgccgcggagaaactggcccagcag
ttgatccaggtggccggacgcgccgggcgcgccgaccggccgggcgaagtctggttgcag
acccatcaccccgaacaccccttgctgcagaccctggtcaatggcggctaccacgccttt
gccgatgccgaactgcagcagcgcgaagcggccggattccctcccttcgcgcacctggcc
ttgttccgtgccgaagccaaggatgtggccgcagccaaccaattcctgctggcggtgcgc
agtttgaccagcgccgagcccggcacgcaatcgccggcgtttgccgcggtggaatgctac
ggcccgatgccggcaccgatgccgcgccgcgccggcttccagcgcacgcagctgctgttg
tcggcgcaacaacgcgcggcattgcatcgcctgctcgacacccaactgccggccatctat
gcgctaccgcaagcccgccgtgtgcgctggtcgctggatgtggacccgatcgacctgtat
tag
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integrated database retrieval system
