Xanthomonas phaseoli: XppCFBP6546_15350
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Entry
XppCFBP6546_15350 CDS
T05156
Symbol
XppCFBP6546P_15350
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xph
Xanthomonas phaseoli
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xph03032
]
XppCFBP6546_15350 (XppCFBP6546P_15350)
03400 DNA repair and recombination proteins [BR:
xph03400
]
XppCFBP6546_15350 (XppCFBP6546P_15350)
Enzymes [BR:
xph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XppCFBP6546_15350 (XppCFBP6546P_15350)
DNA replication proteins [BR:
xph03032
]
Prokaryotic type
DNA Topoisomerases
XppCFBP6546_15350 (XppCFBP6546P_15350)
DNA repair and recombination proteins [BR:
xph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XppCFBP6546_15350 (XppCFBP6546P_15350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ATS30911
UniProt:
A0A0A6TUT3
LinkDB
All DBs
Position
4261749..4264211
Genome browser
AA seq
820 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNGFAMRYDLIEKN
EKHVEAIARAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMAKPRMIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIPREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALAEIRDVIARDFGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSEDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNVPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TANLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPKSGKE
VSARIGRFGPMVQIGTVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSTYASLKKEDDPYTIDLARAVFLIEEKEEIARNRVIKEFDGSDIQV
LNGRFGPYISDGKLNGKIPKDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKTTVK
DSAPKKPAVKKTATTSAASKTAAKKAAKRVVKKTVSKAAG
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgtgacctggtccccaag
gagggggcggtcgatccggacaacggctttgcgatgcgctacgacctgatcgagaagaac
gagaagcacgtcgaagccattgcgcgtgccgccaagggtgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgaaagag
cgcggcctgctcaaggacaagccgatgcagcgggtggtgttcaccgagatcaccccgcgc
gcgatcaaggaggcgatggccaagccacgcatgatcgcaggcgacctggtggacgcgcag
caggcgcgccgcgcgctcgattacctggtcggcttcaacctctcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgctggccgcgtgcaatcgccggcgctgcgcatgatcgtc
gagcgcgaagaagagatcgaagccttcatcccgcgcgaatactggtccatcgatgcgcac
tgccggcatccctcgcaggcgttcaatgcgcggctgatcaagctggacggccagaagttc
gagcagttcaccgtgaccgacggcgacaccgccgaggcggcgcgcctgcgcatccagcag
gccgcgcaaggcgtgctgcatgtcaccgacgtggccagcaaggagcgcaagcgccgcccc
gccccgccgttcaccacctccacgctgcagcaggaggcttcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagttgtacgaaggcgtggcactgggcgatgaa
ggctcggtcggtctgatcagctacatgcgtaccgactcggtcaatctgtcgcaggacgcg
ctggcggaaatccgcgacgtgatcgcgcgcgacttcggcaccgcctcactccccgaccag
cccaacgcctacaccaccaagtccaagaacgcgcaggaagcccacgaagcggtacgcccg
acctccgcgctgcgtaccccggcgcaggtggcgcgtttcctgtccgaggacgagcgtcgc
ctgtacgagttgatctggcgccgcgcggtggcctgccagatgattccggccacgctcaat
accgtcagcgtggatctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtcccgggtttcctggccgtctacgaggaaggcaaggacaccaagagcagcgag
gacgaagacgaaggccgcaagctgccgctgatgaaggcgggcgacaacgtcccgctggac
cgcatcgtcaccgaccagcacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaaggcgctggaggaatacggcatcggccgtccctccacctatgcctcgatcatccag
accctgcagttccgcaaatacgtcgagatggaaggccgcagcttccgccccaccgacgtc
ggccgggcggtgtccaagttcctgtccgggcatttcacccgctatgtcgattacgacttc
accgccaatctggaagacgacctggatgcggtgtcgcgcggcgaagccgagtggatcccg
ttgatggagaagttctggggcccgttcaaggaactggtcgaagacaagaaagactcgctg
gacaagaccgatgccggcagcgtgcgcgtgctcggcaccgacccgaaaagcggcaaggaa
gtcagcgcgcgcatcggccgcttcggcccgatggtgcagatcggcacggtcgaagacgag
gacaagcccaccttcgcgtcgctgcgtccgggccagagcatctactcgatctccatcgaa
gatgcgctggaactgttcaagatgccgagggcgctgggtcaggacaaggaccaggacgtc
agcgtgggcatcggccgtttcggtccgttcgcgcgccgtggcagcacctatgcctcgctg
aagaaggaagacgacccctacaccatcgacctggcgcgcgcggtgttcctgatcgaagag
aaggaagagatcgcacgcaaccgggtgatcaaggaattcgacggcagcgacatccaggtg
ctcaacggacgcttcggcccgtacatcagcgacggcaagctcaatggcaagatccccaag
gatcgtgagccggcgtcgttgacgttcgaagaagtgcagcagctgctggccgacaccggc
aagccggtgcgcaagggcttcggcgccaagaaggccaccctgaagaagacgacggtcaag
gattcggcgccgaagaagcctgccgtcaagaagaccgcgaccacgtccgcagccagcaag
accgccgccaagaaggcggccaagcgcgtggtcaagaaaaccgtgagcaaggccgcaggc
tga
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