KEGG   Xanthomonas phaseoli: XppCFBP6546_16040
Entry
XppCFBP6546_16040 CDS       T05156                                 
Symbol
lpdA, XppCFBP6546P_16040
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xph  Xanthomonas phaseoli
Pathway
xph00010  Glycolysis / Gluconeogenesis
xph00020  Citrate cycle (TCA cycle)
xph00260  Glycine, serine and threonine metabolism
xph00280  Valine, leucine and isoleucine degradation
xph00310  Lysine degradation
xph00380  Tryptophan metabolism
xph00620  Pyruvate metabolism
xph00630  Glyoxylate and dicarboxylate metabolism
xph00640  Propanoate metabolism
xph00670  One carbon pool by folate
xph00785  Lipoic acid metabolism
xph01100  Metabolic pathways
xph01110  Biosynthesis of secondary metabolites
xph01120  Microbial metabolism in diverse environments
xph01200  Carbon metabolism
xph01210  2-Oxocarboxylic acid metabolism
xph01240  Biosynthesis of cofactors
Module
xph_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xph_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xph_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
xph_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xph_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xph00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    XppCFBP6546_16040 (lpdA)
   00020 Citrate cycle (TCA cycle)
    XppCFBP6546_16040 (lpdA)
   00620 Pyruvate metabolism
    XppCFBP6546_16040 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    XppCFBP6546_16040 (lpdA)
   00640 Propanoate metabolism
    XppCFBP6546_16040 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    XppCFBP6546_16040 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    XppCFBP6546_16040 (lpdA)
   00310 Lysine degradation
    XppCFBP6546_16040 (lpdA)
   00380 Tryptophan metabolism
    XppCFBP6546_16040 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    XppCFBP6546_16040 (lpdA)
   00670 One carbon pool by folate
    XppCFBP6546_16040 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xph04147]
    XppCFBP6546_16040 (lpdA)
Enzymes [BR:xph01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     XppCFBP6546_16040 (lpdA)
Exosome [BR:xph04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   XppCFBP6546_16040 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored GIDA HI0933_like DAO NAD_binding_8 AlaDh_PNT_C Thi4 FAD_binding_2 MCRA 3HCDH_N DUF478 FAD_binding_3 Amino_oxidase GCV_H
Other DBs
NCBI-ProteinID: ATS31024
LinkDB
Position
complement(4127507..4129330)
AA seq 607 aa
MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKVGDPLSEGALVLLLETEGEAAAPAKAETKAAPAAAAPTAAPGSKPPVTPSHRAPAEPA
PSKPALASGKPADIECKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCI
PSKALLHAAAVIDEVAHAGDFGVDFGQPRITLDKLREYKEKVVGKLTGGLASMAKQRKVR
TVTGVASFVSPNELEIVGDDGKPQLLRFEHCIIAAGSQAVKLPNFPWDDKRVMDSTDALE
LHDIPKSLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQG
VEVHLKTKATDVKADKSGITVSFEAAVEGEKPGLQATAYDRVLVAVGRSPNGKKIGADKA
GVTITERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVAR
VIPSVAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEET
HRVIGGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITD
LYIPKKK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgttggcgacagcgtggccaaggaccagggcctggtcacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggccgccggtgtggtcaaggaactcaag
gtcaaggtcggcgaccccctctccgaaggcgcgctcgtactgctgctcgaaaccgaaggc
gaggccgctgcgccagccaaggccgagaccaaagccgccccggccgctgcagcgcctacc
gccgccccgggcagcaagccgccagtgacgccgtcgcaccgcgccccggccgaaccggcg
ccgtccaagccggcactggccagcggcaagccggccgacatcgaatgcaagatggtggtg
ctcggcgccggccccggcggctacacggcagcgttccgcgcggccgatctgggcctggac
acggtgctgatcgagcgctacgccagcctgggcggtgtctgcctcaacgtcggctgcatc
ccgtccaaggcgctgctgcatgccgccgcggtgatcgatgaagtggcccatgccggcgac
ttcggcgtggacttcggtcagcccaggatcaccctggacaagctgcgcgagtacaaggaa
aaagtggtcggcaagcttaccggcggcctggccagcatggccaagcagcgcaaggtgcgc
accgtgaccggcgtggccagcttcgtctcgcccaacgagctggaaatcgtcggcgacgac
ggcaagccccagctgctgcgcttcgagcactgcatcatcgccgccggctcgcaggcggtg
aagctgcccaacttcccgtgggacgacaagcgcgtgatggactccaccgacgcgctggag
ctgcacgacattcccaagtccctgctggtggtcggcggcggcatcatcggcctggaaatg
gccaccgtgtacagcgcgctcggcagcaaggtcaccgtggtcgagttcatggaccagctg
atgccgggcgccgacaaggacctggtcaagccgctggccgaccgcctgaaaaagcagggc
gtcgaggttcatctcaagaccaaggccaccgacgtcaaggccgacaagagcggcatcacg
gtgtccttcgaggcggctgtcgaaggcgaaaagcccggtctgcaggccaccgcgtacgac
cgcgtgctggtcgccgtgggccgcagccccaacggcaagaagatcggcgcggacaaggcc
ggcgtcaccatcaccgagcgcggcttcattccggtcgaccggcagatgcgcaccaacgtg
ccgcacatcttcgccatcggcgacatcgtcggtaacccgatgctggcccacaaggccacc
cacgaaggcaagctggccgccgaagtggctgccggcgagaagaaggaatgggtggcgcgg
gtgatcccgtcggtggcctacaccaacccggaaatcgcctgggtcggcgtcaccgaaacc
gaagccaaggccaagggcctgaaggttggcgttgccaagttcccgtgggccgccagcggc
cgcgcgatcggcatcggccgtaccgaaggcttcaccaagctgatcttcgacgaagagacc
catcgcgtgatcggtggtgccatcgtcggcgtgcatgctggcgacctgctggccgagatc
ggcctggcgatcgagatgggtgccgaggccgaagacatcggccacaccatccacgcgcat
ccgaccctgagcgagtcggtcggcatggccgccgaggtctacgacggcaccatcaccgat
ctgtacatccccaagaagaagtga

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