Xanthomonas phaseoli: XppCFBP6546_16040
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Entry
XppCFBP6546_16040 CDS
T05156
Symbol
lpdA, XppCFBP6546P_16040
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph00010
Glycolysis / Gluconeogenesis
xph00020
Citrate cycle (TCA cycle)
xph00260
Glycine, serine and threonine metabolism
xph00280
Valine, leucine and isoleucine degradation
xph00310
Lysine degradation
xph00380
Tryptophan metabolism
xph00620
Pyruvate metabolism
xph00630
Glyoxylate and dicarboxylate metabolism
xph00640
Propanoate metabolism
xph00670
One carbon pool by folate
xph00785
Lipoic acid metabolism
xph01100
Metabolic pathways
xph01110
Biosynthesis of secondary metabolites
xph01120
Microbial metabolism in diverse environments
xph01200
Carbon metabolism
xph01210
2-Oxocarboxylic acid metabolism
xph01240
Biosynthesis of cofactors
Module
xph_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xph_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xph_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xph_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xph_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
XppCFBP6546_16040 (lpdA)
00020 Citrate cycle (TCA cycle)
XppCFBP6546_16040 (lpdA)
00620 Pyruvate metabolism
XppCFBP6546_16040 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
XppCFBP6546_16040 (lpdA)
00640 Propanoate metabolism
XppCFBP6546_16040 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XppCFBP6546_16040 (lpdA)
00280 Valine, leucine and isoleucine degradation
XppCFBP6546_16040 (lpdA)
00310 Lysine degradation
XppCFBP6546_16040 (lpdA)
00380 Tryptophan metabolism
XppCFBP6546_16040 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XppCFBP6546_16040 (lpdA)
00670 One carbon pool by folate
XppCFBP6546_16040 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xph04147
]
XppCFBP6546_16040 (lpdA)
Enzymes [BR:
xph01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
XppCFBP6546_16040 (lpdA)
Exosome [BR:
xph04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
XppCFBP6546_16040 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
GIDA
HI0933_like
DAO
NAD_binding_8
AlaDh_PNT_C
Thi4
FAD_binding_2
MCRA
3HCDH_N
DUF478
FAD_binding_3
Amino_oxidase
GCV_H
Motif
Other DBs
NCBI-ProteinID:
ATS31024
LinkDB
All DBs
Position
complement(4127507..4129330)
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AA seq
607 aa
AA seq
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MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKVGDPLSEGALVLLLETEGEAAAPAKAETKAAPAAAAPTAAPGSKPPVTPSHRAPAEPA
PSKPALASGKPADIECKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCI
PSKALLHAAAVIDEVAHAGDFGVDFGQPRITLDKLREYKEKVVGKLTGGLASMAKQRKVR
TVTGVASFVSPNELEIVGDDGKPQLLRFEHCIIAAGSQAVKLPNFPWDDKRVMDSTDALE
LHDIPKSLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQG
VEVHLKTKATDVKADKSGITVSFEAAVEGEKPGLQATAYDRVLVAVGRSPNGKKIGADKA
GVTITERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVAR
VIPSVAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEET
HRVIGGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITD
LYIPKKK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgttggcgacagcgtggccaaggaccagggcctggtcacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggccgccggtgtggtcaaggaactcaag
gtcaaggtcggcgaccccctctccgaaggcgcgctcgtactgctgctcgaaaccgaaggc
gaggccgctgcgccagccaaggccgagaccaaagccgccccggccgctgcagcgcctacc
gccgccccgggcagcaagccgccagtgacgccgtcgcaccgcgccccggccgaaccggcg
ccgtccaagccggcactggccagcggcaagccggccgacatcgaatgcaagatggtggtg
ctcggcgccggccccggcggctacacggcagcgttccgcgcggccgatctgggcctggac
acggtgctgatcgagcgctacgccagcctgggcggtgtctgcctcaacgtcggctgcatc
ccgtccaaggcgctgctgcatgccgccgcggtgatcgatgaagtggcccatgccggcgac
ttcggcgtggacttcggtcagcccaggatcaccctggacaagctgcgcgagtacaaggaa
aaagtggtcggcaagcttaccggcggcctggccagcatggccaagcagcgcaaggtgcgc
accgtgaccggcgtggccagcttcgtctcgcccaacgagctggaaatcgtcggcgacgac
ggcaagccccagctgctgcgcttcgagcactgcatcatcgccgccggctcgcaggcggtg
aagctgcccaacttcccgtgggacgacaagcgcgtgatggactccaccgacgcgctggag
ctgcacgacattcccaagtccctgctggtggtcggcggcggcatcatcggcctggaaatg
gccaccgtgtacagcgcgctcggcagcaaggtcaccgtggtcgagttcatggaccagctg
atgccgggcgccgacaaggacctggtcaagccgctggccgaccgcctgaaaaagcagggc
gtcgaggttcatctcaagaccaaggccaccgacgtcaaggccgacaagagcggcatcacg
gtgtccttcgaggcggctgtcgaaggcgaaaagcccggtctgcaggccaccgcgtacgac
cgcgtgctggtcgccgtgggccgcagccccaacggcaagaagatcggcgcggacaaggcc
ggcgtcaccatcaccgagcgcggcttcattccggtcgaccggcagatgcgcaccaacgtg
ccgcacatcttcgccatcggcgacatcgtcggtaacccgatgctggcccacaaggccacc
cacgaaggcaagctggccgccgaagtggctgccggcgagaagaaggaatgggtggcgcgg
gtgatcccgtcggtggcctacaccaacccggaaatcgcctgggtcggcgtcaccgaaacc
gaagccaaggccaagggcctgaaggttggcgttgccaagttcccgtgggccgccagcggc
cgcgcgatcggcatcggccgtaccgaaggcttcaccaagctgatcttcgacgaagagacc
catcgcgtgatcggtggtgccatcgtcggcgtgcatgctggcgacctgctggccgagatc
ggcctggcgatcgagatgggtgccgaggccgaagacatcggccacaccatccacgcgcat
ccgaccctgagcgagtcggtcggcatggccgccgaggtctacgacggcaccatcaccgat
ctgtacatccccaagaagaagtga
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