Xanthomonas phaseoli: XppCFBP6546_20840
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Entry
XppCFBP6546_20840 CDS
T05156
Symbol
XppCFBP6546P_20840
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xph
Xanthomonas phaseoli
Pathway
xph00040
Pentose and glucuronate interconversions
xph01100
Metabolic pathways
xph02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
XppCFBP6546_20840 (XppCFBP6546P_20840)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XppCFBP6546_20840 (XppCFBP6546P_20840)
Enzymes [BR:
xph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
XppCFBP6546_20840 (XppCFBP6546P_20840)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
ATS32350
UniProt:
A0AB34QH24
LinkDB
All DBs
Position
complement(3012505..3013206)
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AA seq
233 aa
AA seq
DB search
MRCYSKSGGRRGGEDADSISLEGNSSGEPSKIWIDHNTIFASLTKCSGAGDASFDGGIDM
KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNAAARTTYHHNRFENVESRLPLQRRGLSH
IYNNYFNNVFTSGINVRMGGVAKIQSNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
STPDGSKPYANATNWVSSKVFPESLGYIYTVTPAAQVKAKVIATAGAGKNLAE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ctgcggtgctactcaaaatcggggggacgtcgaggcggcgaagatgccgattcgatctcg
ctggaaggcaactccagcggcgagccgtccaagatctggatcgatcacaacaccatcttc
gcctcgctcaccaagtgctccggtgcaggcgatgcctccttcgacggcggcatcgacatg
aagaagggcgtgcaccacgtcaccgtgtcctacaactatgtctacaactatcaaaaggtc
gcgctcaacggctacagcgacagcgacaccaagaacgcggctgcgcgcaccacgtatcac
cacaaccgcttcgagaacgtggaatcgcgcttgccattgcagcgccgcggcttgagccac
atctacaacaactatttcaacaatgtgttcacctcgggcatcaacgtgcgcatgggtggg
gtggccaagatccagtccaactacttcgagaacatcaagaacccggtgacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgttggcagcggcatcacctgg
agcacgccggacggcagcaagccctacgccaatgccaccaactgggtgagctccaaggtg
ttcccggagtcgctgggctacatctacaccgtgaccccggcagcacaggtcaaggccaag
gtgatcgccaccgcgggtgcgggcaagaacctggcggagtga
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