Xenorhabdus poinarii: XPG1_0268
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Entry
XPG1_0268 CDS
T03805
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XPG1_0268 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpo03400
]
XPG1_0268 (recB)
Enzymes [BR:
xpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XPG1_0268 (recB)
DNA repair and recombination proteins [BR:
xpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XPG1_0268 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDG19923
UniProt:
A0A068QY84
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All DBs
Position
293171..296812
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AA seq
1213 aa
AA seq
DB search
MSGHQAVASHKLNPLTLPLYGQRLIEASAGTGKTYTIGLLYLRLLLGLGGSAAFSRPLNV
EEILVVTFTEAATDELRGRIRENIHQLRLACIRAETVVSDLTYQQLLDEIPDKESAASWL
LAAERQMDEAAIYTIHGFCQRMLAHNAFESGVLFEQTLIQDESQLWKQGCADFWRRHCYP
LPVPIAVEVSRIWNGPEALLKDIAGYLHGDMPYIDNAPEEDETLFSRHQKIIEQIDSIKR
QWNDAAAELEGLIMLSGVDKRSYSKKYLPNWLRSVSEWARSPTTDYQLPKDLDKFCQSRL
LEKTKKGDVPQHPLFEAIDGLYQYPLTLKDIIIAKAIVEVRQSVNQEKLTRGYMGFDDLL
TRLDSALQRAGGKQLAATIRQRYPVAMIDEFQDTDSQQYRIFQAIYCPSSETRSPNAETP
EHGLLFIGDPKQAIYAFRGADIFTYIRARSNVKAHYTLETNWRSSVSMVQAVNKLFLQSE
RPFWFEQIPFIHVKAAEKNQALKFSFYDADQPALRFWLQPGEGVSKGAYEQHMARQCAAQ
IRDWLQAGQAGKALLYRTGKASCPVRAADITVLVRDRREAALIRNELNTLNIPSVFLSNR
ESVFATPEAKDVLWLLQAVLAPEKARELRCALASSLFGFSAKHIDQWNHDEAAWDRLVDE
FDGYARLWRTRGVLPMLRAVMAKYRIAENLLAGDDGERRLTDVMHIGELLQETAQQLDSE
HAVVRWLAQQISRPNPQAESQQLRLESDRNLVQICTIHKSKGLEYPLVCLPFICGYRKQK
QAVYHDRHHFETHLSLSHDDEILKKALALADEERLAEDLRLLYVALTRSVYHCSVGVAPL
IKGNRGKSGETDLHLSALGYLLQKGQKGDAELLRSSLNALCDDNIELKQVDEIIDSPWCA
QSENRVSLAARRFQRSLRDDWRVTSYSGLQYAAAHTSAGVFGESVEVIVQSMSPKLDMDA
RGEKAGKPSLQMTPHTFPRGAAAGTFLHSILEALDFSERPDPAWLAEKLTASGFDEKWTS
ILARWIDDIVGAELNEQGIQLARVPHHQRQSEMQFYLPVDKLLHAKEMDALTRRYDPLSA
QCAPLSFHQVKGMLKGFIDLVFCWQDKFYVVDYKSNWLGENSQAYTQEAMAKAMIEHRYD
LQYQLYTLAVHRYLRHRLANYDYRQHFGGVMYLFLRGIDKANPGQGIYHYLPPFEFIDEL
DTLFSDVGEGKSG
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcatcaagcagtcgcgtctcataaacttaatccgttaacgttgccgctgtat
ggtcagcggctgatagaggcgtcggcaggcacggggaagacgtatacgataggcttactg
tatcttcgtctgttattgggattgggcggctcggctgccttttcccggccgctgaatgtt
gaagaaattttggttgtgacctttacggaagccgcgacagacgagttgcgtgggcgtatt
cgtgaaaatattcaccaactccgcttggcctgtatacgggcagaaacggtggttagtgac
ctgacttatcagcaattgttggatgaaatccctgataaggaaagtgcagccagttggtta
ttggccgctgaacgccagatggatgaagcggcgatttacaccattcacggtttttgccag
cgcatgttagcgcataacgcatttgaatccggtgtgttatttgaacaaacgttaattcag
gatgaaagccaactgtggaaacaaggttgtgctgatttttggcggcgtcattgttatccc
ctgccagtgccaattgctgtggaagttagccggatatggaatgggccggaagcattattg
aaagatattgcgggctatttacacggcgatatgccgtatatcgacaatgcgcctgaagag
gatgaaacgctgtttagccgtcatcaaaaaatcattgagcaaattgattcgataaagcgt
cagtggaatgatgccgcggctgaattagaagggcttatcatgctctcaggtgttgataag
cgtagttacagcaagaagtatttgcctaattggttgaggagtgtttctgaatgggccaga
tcgcccaccaccgactatcaactgcctaaagatttggataaattttgtcagtctcgttta
ttggaaaagaccaaaaaaggggacgtgccgcagcatccgttgtttgaagccattgatggg
ttatatcagtatccactgacactgaaagatattattatcgccaaagcgattgtcgaagtg
cgtcaatctgtcaatcaggaaaaactgactcggggctatatgggctttgatgacctgttg
acccgcctggatagtgctttgcagcgcgccggaggcaagcagcttgcggcaactatccgg
cagcgttatcccgtcgcaatgattgatgagtttcaggatacggactcacagcagtatcgc
attttccaggccatatattgcccctcatcagaaacccgctcgccaaatgcggaaacacca
gaacatggcttgctgttcattggcgatcccaaacaagcgatttacgcgtttcgtggcgct
gatatttttacctacatccgcgcccgttctaacgtcaaggcacattacacgctggaaacc
aactggcgttcttctgtgtccatggtgcaagcggtgaataaactgtttctccagtcagag
cgcccattctggtttgaacagatcccattcattcacgttaaagctgcggagaaaaatcag
gcgctgaaattttctttttatgatgcggatcagccggctttgcgattttggttacagcct
ggtgaaggcgtttccaaaggtgcctatgaacaacacatggctcgacagtgtgcagctcag
ataagagattggttgcaggcaggacaagccggaaaagcacttttataccgaaccggaaaa
gcaagttgcccggtcagagcggcagatattacggtattggtacgtgatcgccgggaagcc
gcgttaatccgtaatgagttaaatacgctgaacataccctcggtttttttatccaaccgg
gaaagtgtgtttgcgacgccagaagcgaaagatgtgctttggttattgcaagccgtattg
gcgccggaaaaagcacgggaattgaggtgtgcattagccagcagtttgtttggttttagt
gccaaacacattgatcaatggaatcacgacgaagcggcgtgggatcgtttagtcgatgaa
tttgatggttatgctcgtttgtggcgtactcgtggtgtattaccaatgctacgggcggtc
atggcgaaatatcgaatagcagagaacctgttggccggtgatgacggtgaacgtcggctt
actgatgtgatgcatattggtgagttattgcaggaaaccgctcagcagttagatagcgaa
catgccgttgttcgttggctggcgcaacaaatttcacgtccgaatccacaagcagaaagc
cagcagttgaggctggagagcgatcggaatttggtgcaaatctgtactattcataaatcg
aaggggctggaatatccgttggtttgtttgcctttcatctgtggttaccggaaacagaag
caggcggtttatcacgatcgccaccactttgaaacccacctcagcttgtcccatgatgat
gaaatattgaaaaaagcgctggcgctggccgatgaagagcgtttggctgaggatctccgt
ttgctgtacgtcgcgttaacacgctcagtttatcactgtagtgttggtgtggcaccgctt
atcaaagggaatagggggaaatcgggtgagacggatttgcacttgtcggcgcttggatac
ctgttacaaaaggggcagaaaggggatgccgaactcttgagaagcagcttgaatgcgctt
tgtgatgacaatatagaacttaaacaggtagacgagattattgattcgccctggtgcgca
caaagtgaaaatcgtgtatcgctggcagccagaagatttcagcgttcccttcgggatgac
tggcgggtgacgagttattccggtttgcaatatgcggctgcccacacgtctgcgggtgta
tttggcgagtccgtagaggtgattgtgcaatccatgtctccgaagctggatatggatgct
cgtggtgaaaaggcgggaaaaccgtcgctacagatgacgccacatacttttccacgaggg
gccgcggcggggacattcctgcacagtattttagaggcgctggatttcagtgagcgcccg
gatccagcgtggttagcggaaaaactgactgcctcaggatttgacgaaaaatggacctcg
atcctggcgcggtggatagacgatatcgttggcgcagaactgaacgaacaaggcatacaa
ttggctcgtgtgccccatcatcaacgacaaagtgagatgcagttttacctgcccgtggat
aagctattgcatgcaaaggaaatggatgccctgacgcgtcgctatgatccgttgtcagca
cagtgtgcgccgctatcctttcatcaggtcaaaggcatgttaaaaggctttatcgatttg
gttttttgctggcaggataagttttacgtcgtggattacaaatcaaattggttgggggaa
aacagccaggcatatacgcaagaggcgatggcaaaagccatgatagaacatcgttatgac
ttgcagtatcagctttatacattggctgtgcaccgttatttacgccatcggctggccaat
tatgattatcgtcagcactttggtggcgtgatgtacctgtttctgcgtggtattgataag
gcgaatccggggcagggaatctaccattatctgcccccctttgaatttattgatgaactg
gatacgctttttagcgatgttggtgagggaaaaagcggatga
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