Xenorhabdus poinarii: XPG1_0417
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Entry
XPG1_0417 CDS
T03805
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
xpo
Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpo03400
]
XPG1_0417 (sbcC)
DNA repair and recombination proteins [BR:
xpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XPG1_0417 (sbcC)
Archaeal homologous recombinant proteins
XPG1_0417 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
cobW
ABC_tran
Rad50_zn_hook
AAA_22
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CDG20072
UniProt:
A0A068QYE4
LinkDB
All DBs
Position
complement(425579..429289)
Genome browser
AA seq
1236 aa
AA seq
DB search
MKILSLRLKNINSLHGEWKIDFTKEPFINNGLFAITGPTGAGKTSLLDAICLALYHETPR
LSTISASQNELMTHHTAECLAEVEFEVKGIAYRAFWCQRRARNQANGNLQPPKVELADKK
SGKILADKIQDKKEKIAEITGLDFSRFTKSILLSQGNFAAFLNAQDKDRADLLEELTGTE
IYGILSQEIYQRYKEAQSELNLLQAKASSIELLTPEQQQAYQDQQQRLIAEETLFNQQMK
AWQTAEQWLLRRNELQQSQVSHASLLQQAEQAIQEAQPQLQQLATSEPAEKIRPLWDAQN
RAIHEKQRLMEQRTKIENEYQQQLALRQPAEHQLTQLENIREAHQQHHKQQEKRISEQIV
PLDHKIDIESQDLLKLKKAISEQERELTGLLSQHQKTQQQVTALNNELQALESYDEQHTY
YRDFDRKLPEWKQLFTRQQERQEKIDQLTQNTRQIIAEIARNADHLTTLKAALAQQQEQR
QIRRNTLSSAEKQLTVLQQKHPLQQLQKNLETYQKQLGSQNQLAILFPQIQQCQDAIKID
QNQLIQFQASINTRPNKIATLNQQLVDKQQHYDDLIHRIRFEQRIVSLEKERAQLKDGES
CPLCGSSHHPLIDEYQHISPLHSEDRLKTLRQQIDQLQEKRATLQQQQHTEQQHYAQLQH
NIAHCNAKLTEFIKQWDHHCQQLQVIELQINAESVTHFINQRQSAYHQYQAQWESLLQAE
KNHQAAEKALIANQEQYQACKKAIELETFKRDSAQKQLAEKTAEMQQIEADYAATAQQIA
AELKLTPFALPAPQDTENWLQQREQELKDYRNSRERWQQRQKEQAALQSKLSELAKQKDK
LTIDLHALNEQQQQQKQLLAQSRQERHNLFGEQSVTDVRQHLQQKANELETAYKQAALHL
QQLQNKMSQLIGAVSEIEKSYTTAEASCELAVSHFQTGLAQQGFPHQQSFEDALLAPEQR
EKLQQLQEKLEQQQLQAKTRQSESEIALQRHMATQPPLPEQYALEQYALEQYEVQQLSTL
LTDITTQLKHNNQQQGEVRTLLSSDATRRQQQQALLTQIALSQQNYDDWSYLNNLIGSAD
GAKFRRFAQGLTLDHLVHLANIRLEKLHGRYYLQRKDDGGLGLQVVDTWQADAIRDTKTL
SGGESFLVSLALALALSDLVSHKTQIESLFLDEGFGTLDAESLDIALDALDHLNASGKTI
GVISHVEALKERIPVQIKVEKKNGSGSSQLAPEFRI
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgagcttacggctgaaaaatatcaattccctgcacggcgaatggaaaatt
gactttacgaaagaaccctttatcaacaatggattatttgcaattacgggtccaactggc
gcgggaaaaacgtccttactggatgccatttgtctcgccctctaccatgaaaccccacgg
ctcagtactatttcagcctctcaaaatgaattaatgactcaccatacagcagaatgcctt
gctgaagtggaatttgaagtcaaaggtattgcttaccgggcattctggtgtcagagacgt
gcccgcaatcaggcgaatggcaatctccagcctcccaaagtcgaactggctgataagaaa
agcgggaaaattctggctgacaaaatccaggataaaaaagaaaaaatcgccgaaatcacc
ggactggattttagccgctttaccaaatctatacttttatcacagggaaattttgccgca
tttttaaatgcacaggataaagatcgggccgatctactggaagaactgacggggacagaa
atttacggcattctgtcacaggagatttatcagcgctacaaagaggctcaatctgagctc
aatcttctgcaagccaaagcctcttccattgaattactcacacctgaacagcaacaggca
taccaagatcagcaacaacggcttattgcagaagaaaccttgtttaatcaacaaatgaaa
gcatggcaaacggccgaacaatggctgttacgacgaaatgaactacagcaatcacaggta
agtcatgcttcacttttgcaacaagcagagcaagccattcaagaagcgcaacctcagtta
caacaactggcaaccagcgagccagccgaaaaaatccgtccattatgggatgcacaaaat
cgggctatccatgaaaaacagcggctcatggaacaacgtacaaaaatagagaatgaatac
cagcaacaactggcattacggcaacctgcggaacatcaactgacgcagttggaaaacatt
cgggaagcacaccaacaacatcataagcagcaggaaaagcgcatttcagagcaaattgtg
ccgctcgatcataaaattgatattgaatcccaagatctcctgaaactgaaaaaagcaatt
tcagaacaagaacgcgaactgacaggcctattatcccagcaccaaaaaacacagcagcaa
gtcactgccttgaataacgagctacaggcgttggaatcctatgatgaacaacacacttat
taccgcgatttcgaccgcaagctgcctgaatggaaacaacttttcacccgccagcaagag
cggcaggaaaaaatagatcaactcacccaaaatacccgacaaattattgctgaaattgcc
cgtaatgccgatcatttaacgacattgaaggcggcattggctcaacaacaagaacagcgc
caaatacgacgaaacacgctctcttcggctgaaaagcaacttaccgttttgcagcagaaa
cacccattacagcaactgcaaaaaaatttagaaacgtatcagaaacagttaggatcacag
aaccaactggcgatcttgtttcctcagatccaacaatgccaagatgcgatcaaaatcgat
cagaatcagttaatccaatttcaagcatcaatcaacacccgacccaataagatcgcaacg
ctcaatcaacaattagttgataagcaacaacactacgacgatctcatccatcgaattcgt
tttgagcagcggatcgtcagtctggaaaaagagcgggcacaattaaaagacggtgaatct
tgtccactttgtggttcgagtcatcacccattaatcgacgaataccagcatatttcgcca
ttgcactcagaagatcgcttgaaaaccctgcgtcagcaaattgatcaattacaagaaaag
cgcgcaacgttacaacagcaacaacacactgagcagcagcattacgcgcaattacaacac
aatattgcgcactgcaacgctaaattgacagaattcattaagcaatgggatcatcattgc
caacagctacaggtgatagaactacagatcaatgcagaatcggtgactcacttcatcaat
cagcggcagtctgcttatcaccagtatcaggctcagtgggaatcacttttacaggctgaa
aaaaaccatcaggcagcagaaaaagcgctgatcgccaaccaggaacaatatcaggcctgt
aaaaaggccattgagctggaaacattcaaacgggattcagcccaaaaacaattggccgaa
aaaacagcggaaatgcaacagatagaggccgactatgcggctaccgcacaacaaatagcg
gcagagttaaaattgacaccttttgcactgcccgccccccaggacacagaaaactggctg
caacaacgtgaacaagaattaaaagattatcgcaattcacgcgagagatggcagcaacga
caaaaagaacaagccgccctgcaaagcaaactcagtgaattggcaaagcaaaaagataag
ctgaccattgaccttcatgcattaaatgaacaacaacagcaacaaaaacagttattggcg
caatcccgtcaggaacgccacaatttatttggtgaacaatccgttactgacgttcgtcaa
catttgcagcaaaaagccaatgaactggaaaccgcttacaaacaggcagcccttcacctg
caacagttgcaaaacaaaatgagccaattaatcggggcagtcagtgaaatagaaaaaagt
tacacaacagcggaagcaagttgtgaacttgctgtcagccatttccaaacaggcttagcg
cagcaaggctttcctcatcaacaatcttttgaagatgctttattagcgccggaacaacga
gagaaattacaacaattacaggaaaaacttgaacaacaacaattgcaggccaaaacaaga
caatctgaatcagaaattgcattacagcgccatatggcaacgcaacctccgttgcctgaa
caatacgcacttgaacaatatgcgcttgaacagtatgaggtacaacagctatccacccta
ttgactgatattactactcaattgaaacacaataaccaacaacaaggtgaagtcagaacg
ctattgagcagcgatgcaactcgccgtcaacaacaacaggcgctactgacacagatcgca
ctttcacaacaaaactacgatgactggagttatctcaataacctcattggttccgcagat
ggcgctaaattccgccgttttgcccaaggcttgacactggatcatctcgtgcatctggcg
aatatccgactggaaaaactacatggtcgctactatttgcaacgtaaagacgatggcgga
ttggggttacaagttgttgatacctggcaagcagatgctattcgggataccaaaaccctc
tctggcggtgaaagtttccttgtcagccttgcccttgcccttgccttgtctgatctcgtc
agtcacaagactcagatagaatccctattccttgatgaaggttttggtacactggatgcc
gaatcccttgatattgcactagatgcactggatcatctcaacgcctcaggaaaaaccatt
ggcgtaatcagccatgtcgaagcattaaaagagcgaattcctgttcagatcaaagtagaa
aaaaagaatggatcgggttccagtcaactcgcgccagaatttcgaatttag
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integrated database retrieval system
