Xenorhabdus poinarii: XPG1_0606
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Entry
XPG1_0606 CDS
T03805
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XPG1_0606 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpo03019
]
XPG1_0606 (pcnB)
Enzymes [BR:
xpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
XPG1_0606 (pcnB)
Messenger RNA biogenesis [BR:
xpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XPG1_0606 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CDG20261
UniProt:
A0A068R057
LinkDB
All DBs
Position
complement(617512..618867)
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AA seq
451 aa
AA seq
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MKKKPAKEKPSDAPITVIPRAQHPISRKDISDNALKVLYRLNKSGFEAYLVGGGVRDLLL
HKKPKDFDIATNATPEQVRKLFRNCRLIGRRFRLAHIMFGPDVIEVATFRGPHDHIETND
RNQSHKAQSGMLLRDNIFGSVAEDAVRRDFTINSLYYGIEDFSLRDYVGGLADLNAGIIR
LIGEPETRYREDPVRMLRAVRFASKLDMTIEPNTAEPIPRLAFLLKDIPPARLFEESLKL
LQSGQGYQTYKLLREYHLFQPLFPIIQRGFTQGGDAPMEKLLIQVLKNTDLRLQNDKKVN
PAFLFAAMLWYPLLEHAEKLAQEGGLPYNQAFSLATDDILNEQCRSIAIPKRHTTTMRDI
WSLQLRLPHRQGKQANKLMEHPKFRAAYDLLELRADVELRHELKDLVQWWGEFQQSTPPQ
QRGMISKLGNKPIRRRIRSRRRPVNHNRNND
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagcccgcaaaggaaaagccttcggacgcccctatcacggtgatcccgcga
gcgcaacaccctatttcacgtaaggacattagcgataatgcgctgaaggtgctgtatcgc
ctgaataaatcaggctttgaagcttatctcgttggtggcggggttcgggatctattgctg
cacaaaaaacccaaagattttgatatagcaacgaatgccacacctgaacaagtccgtaaa
ttgttccgtaactgccgtctcatcgggcgccgttttcgcctcgcccatattatgtttggc
cctgatgtgattgaagttgccaccttccgtgggccacatgatcacattgaaaccaacgac
cggaatcagtcgcataaagcccaaagcgggatgttgctgcgcgataatattttcggttca
gtggcagaagatgcagttcgtcgcgatttcacaatcaatagcctctattacggcattgaa
gatttttcgctgcgggattacgttggtggcctagccgatctgaacgcgggcatcattcgc
ctgataggggaacctgaaacccgttatcgggaagatcctgtccgtatgttacgggctgtc
cgcttcgccagtaaactggacatgaccatcgaacctaacacggcggaaccaattccgcgt
cttgccttcctgctaaaagatattccaccggcacgcttgtttgaagaatccctgaaactg
ctacagtcaggtcagggctatcagacctataaactgctgcgcgaatatcatctgttccag
ccattatttccgattattcaacgtggtttcacccagggtggtgatgctcccatggaaaaa
ttgctgatacaggtactgaaaaatacggatcttcgtttgcaaaatgacaagaaggtgaat
cccgctttcttatttgcagctatgctatggtatccgctgcttgaacacgccgaaaaactg
gctcaggaaggtggattaccgtataaccaggccttttcgttagcaaccgatgatatcctt
aacgaacagtgtcgttccattgcgatcccaaaacgccataccaccaccatgcgtgatatc
tggtcgcttcaacttcgtctgccacatcgtcagggaaaacaggccaataaattgatggaa
catccaaagttccgagctgcgtatgatttactggaattacgtgctgatgttgagctacgc
catgaactgaaagacttggtgcaatggtggggggagttccaacaatcaacaccgccacaa
caacgtggaatgatatcaaaactgggcaacaaacccattcgccgcagaatacgctcccgt
cgtagacccgttaatcacaataggaataacgattaa
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