Xenorhabdus poinarii: XPG1_1324
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Entry
XPG1_1324 CDS
T03805
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03030
DNA replication
xpo03430
Mismatch repair
xpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XPG1_1324 (holB)
03430 Mismatch repair
XPG1_1324 (holB)
03440 Homologous recombination
XPG1_1324 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpo03032
]
XPG1_1324 (holB)
03400 DNA repair and recombination proteins [BR:
xpo03400
]
XPG1_1324 (holB)
Enzymes [BR:
xpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XPG1_1324 (holB)
DNA replication proteins [BR:
xpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XPG1_1324 (holB)
DNA repair and recombination proteins [BR:
xpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XPG1_1324 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol3-delta_C
DNA_pol3_delta2
HolB_lid
DUF6966
Motif
Other DBs
NCBI-ProteinID:
CDG20979
UniProt:
A0A068R1Q1
LinkDB
All DBs
Position
1309192..1310190
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AA seq
332 aa
AA seq
DB search
MNWYPWLNHAYRQLVEFHQQGRGHHTILLHAYAGMGADALSYGLSRWLMCQNKQGIKSCG
KCHGCHLMLAETHSDWHVLTAEKGKNIIGVDAVRQLNEKLYEYSQQGGAKIVWIPSAESL
TEAASNALLKTLEEPLKNTYFLLQCQSPVNLLATLRSRCFYYFVPVPATSIGLHWLQNQL
PACSSLEVQTALKLSQGAPLAAQKLLQTEKWQQRNSLCQAIEQALHKCDTLSLLPLLNRD
DVQQSLHWLISLLSDAVKWQWQAADYCVNQDQQVLIHYLASSQCAETLLHAVDDWVHCRH
QLFSVMGVNRELLLTEQLLNWERQFCPAQSLT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtatccgtggctcaatcacgcctatcgtcagttagttgaattccatcaacag
ggacgtgggcatcatactattttgctgcatgcgtatgcaggaatgggggcggatgcactg
tcgtatggtttgagtcgctggttaatgtgccagaataaacaggggattaaaagctgtggc
aaatgccacggctgccatttaatgttggcggaaacccactctgactggcatgtcctgacg
gctgaaaagggaaaaaatatcattggcgtggatgcggtgcgtcagctcaatgagaagctc
tatgaatattctcagcaaggcggagcgaagattgtttggataccctctgcagaatctctg
acagaggcggcgtctaacgctttgttgaaaacattagaagaacctcttaagaacacctat
tttctcttgcaatgccagagtcctgtcaatttgctggcaacattgcgtagccgttgtttt
tactattttgtgccagtaccggcaacttcaatagggcttcattggttgcaaaatcagctt
ccggcgtgctcttcgctggaggtacaaaccgcacttaagctttctcagggcgcgccatta
gcggcgcagaagctacttcagactgaaaaatggcaacaaagaaattcgctttgccaggcg
attgaacaagcgttgcataaatgtgataccctgtcacttttacccttgttaaatcgtgat
gatgtccagcaatcactgcattggctgattagcttattatccgatgctgtgaaatggcag
tggcaggcagcagattactgcgttaaccaagatcagcaggttttgattcattaccttgcc
tcttctcaatgtgctgaaacgctcttacatgcagttgatgattgggtacactgccgtcac
caattattttctgtcatgggcgtcaatcgggaattgttgctgacggaacaattactcaat
tgggaaagacagttttgtcctgcacagtcacttacttag
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