Xenorhabdus poinarii: XPG1_1571
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Entry
XPG1_1571 CDS
T03805
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS
KO
K19236
L,D-transpeptidase YcfS
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
XPG1_1571 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xpo01002
]
XPG1_1571 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xpo01011
]
XPG1_1571 (ycfS)
Peptidases and inhibitors [BR:
xpo01002
]
Cysteine peptidases
Family C82
XPG1_1571 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
xpo01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
XPG1_1571 (ycfS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
CDG21226
UniProt:
A0A068R2Y2
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Position
1527617..1528666
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AA seq
349 aa
AA seq
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MKRFSTFTGMFLSSMLLLSGMTYPAHAIEYPLPPANSRLIGENATYIVPDGGLSLEAIAA
KYKIGLLAMLEANPGVDPYLPTPGTRLIIPSQMLLPDTPRQGIIVNLAELRLYYFPQGKD
VVVVYPIGIGQLGRETPTMTTSVSQLIKHPTWTPTVNIRRDYASRGIILPAVVPAGPDNP
MGDFALRLAAGHGEYLIHGTNANFGIGMRVSSGCIRLRPDDIESLFRTVPRGTRVQIINE
PVKYAIEPDGQRYVEVHQPLSNKENDDPQMIPIPRSEGLMKFIEDRGTDEALVDQAIMRR
SGMPLQVNTGLVITHQQENKMTEKEVAPTIQPAKLPPLHQPTPVYQSEP
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattttcaacttttaccggcatgttcttgagcagtatgttattgctcagtggg
atgacttatccagcccatgctattgaatatccattgccccctgctaacagtcgtctgatt
ggtgaaaatgccacatatattgtgcccgatggtgggctttcgttggaagcgattgcagcg
aaatacaaaatcggtttactggcgatgttggaagctaatcctggcgttgatccctattta
cctaccccgggaacccggctgattattccgtcacagatgctgcttccagatactcctcgc
cagggaattatcgtcaatctggcggaacttcgactctactattttcctcaaggaaaagat
gttgtcgttgtgtatccgattggaataggtcaacttgggcgagaaacacccaccatgaca
acctcggtcagtcaattgattaaacatccgacgtggacaccaaccgtgaatattcgtcgg
gattatgcaagcagaggtattattttacccgccgtagtccccgcaggcccggataatcct
atgggggattttgcgttacgtttggctgccggacatggtgaatacctgatccatggtacc
aatgccaattttggcattggtatgcgtgtgagttcagggtgtattcgtttgcgacccgat
gatattgagagtctgtttcgaactgttccgcgagggacacgggttcaaatcattaatgaa
ccggtgaaatatgcaatcgagcccgatggtcagcgttatgtggaagtgcatcagcctctg
tcaaataaagaaaacgatgatccgcaaatgataccgatcccacgttctgaaggcttgatg
aaatttattgaagatcgtggaaccgatgaagcacttgtcgatcaggccattatgcgtcgc
tcaggtatgccattacaagtgaatactggcttggttatcactcatcaacaagaaaataaa
atgacagaaaaagaggttgcgcccaccattcaaccggctaaattgccgccactccaccag
ccaacgccggtttatcaatctgaaccttaa
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