Xenorhabdus poinarii: XPG1_1791
Help
Entry
XPG1_1791 CDS
T03805
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xpo
Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpo03016
]
XPG1_1791 (rnd)
Enzymes [BR:
xpo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XPG1_1791 (rnd)
Transfer RNA biogenesis [BR:
xpo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XPG1_1791 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CDG21446
UniProt:
A0A068R3E6
LinkDB
All DBs
Position
complement(1763005..1764129)
Genome browser
AA seq
374 aa
AA seq
DB search
MNYQLITTDAQLQSICERAKQHASIALDTEFVRTRTYYPQLGLIQLFDGEQLSLIDPLEI
SQWQPFKALLTDPDVLKLIHAGSEDLEVFGHSFQCLPEPMMDTQVLAAFIGHPISCGFAT
LVAQYLHVELDKSESRTDWLARPLSEKQCQYAAADVYYLLPLADILIEKAEQAGYLDAAK
DESDLISQRRKEILKPESAYKAIGNAWQLRPNQLACLKRLAAWRLNQARERNLAVNFVIR
EENLWQVARYMPTSLAELDALGLSGQEIRCHGRRLLAMVAESRDIPEEEYPPQIINLVDY
PGYRNAFKEIKSLVTQVGSAHHLSAELLASRRQINQLLCWHWKLKSSTYQPELIRGWRGK
LLAEPIVDILANYS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagctgattaccaccgatgcccaattgcagtcgatctgtgaacgggcaaag
caacacgcaagcattgcactagatactgaatttgtacgtacacggacgtactatccccaa
ttagggttgatacaactgtttgatggtgaacagctttctctgattgatccccttgaaatt
tcacaatggcaaccctttaaggcgctattgactgatccagatgtattgaaacttatccat
gcaggcagtgaagatttggaggtttttggtcatagcttccagtgcttgccggaacccatg
atggatactcaggtcctggctgcatttattggtcacccgatatcatgtggatttgcaacg
ctggttgcccaatatttgcatgttgaattggataagagcgaatcccgtactgattggctg
gcgcgtccattaagtgaaaagcaatgccaatacgcggcggcggatgtctactacttatta
ccactggccgatatattgatcgaaaaggcagaacaagcagggtacttggatgcggcaaag
gatgaaagtgatttaatatcccaacgtcgcaaagaaatactgaagccggaatcagcttat
aaagctattggtaacgcgtggcaattacgtccaaatcaattggcttgtttgaaaaggttg
gctgcatggcgcttaaatcaggcacgtgaacgtaatctggccgtcaattttgtgatccgt
gaagaaaatttatggcaggttgctcgttatatgccaacgtctttggctgaactggatgcg
ttgggattgagtggtcaggaaatccgttgtcatggacgtcgattgctggcgatggtggca
gaaagcagagatattccagaagaagagtatccgcctcagattataaacttggtggattat
cctggctatcgcaatgcattcaaggaaataaaatcattggttactcaggtggggagcgct
catcatctcagtgccgaattactggcttcccgtcgtcaaattaatcaattactttgctgg
cactggaaattaaaatcgtcgacgtatcaacccgaattaatcagggggtggcgtggtaag
ttgctggccgaacccattgttgacatattggcaaactattcgtag
DBGET
integrated database retrieval system
