Xenorhabdus poinarii: XPG1_2767
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Entry
XPG1_2767 CDS
T03805
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xpo
Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpo03016
]
XPG1_2767 (truD)
Enzymes [BR:
xpo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
XPG1_2767 (truD)
Transfer RNA biogenesis [BR:
xpo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XPG1_2767 (truD)
Prokaryotic type
XPG1_2767 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DRC7_C
Motif
Other DBs
NCBI-ProteinID:
CDG22419
UniProt:
A0A068R5X9
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All DBs
Position
complement(2672126..2673175)
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AA seq
349 aa
AA seq
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MTLSELHWLFGKPEATGIVKATPEDFIVREDLGFSPEGEGEHLMVHIRKTGCNTQFVADH
LARFAKIPARAVSYAGLKDRNAVTEQWFCLHLPGKQTPDLAAFQLEGCEVLAVTRQKRKL
RIGALKGNDFTLVLREISDRQWVEKRLQQIAHAGVPNYFGEQRFGRDGQNLVQAQRWAAN
EIHVKERNRRSFYLSACRSAMFNAITSTRIAQHEHQQVKKGDALQLTGRGSWFVADEAEL
SALQQRVMAGELQITAPLPGDNALGTQHQALDFEQQCLLDYEPLWALVKRERVESSRRAM
LVKPLNLRWDWRDDQTVILHFSLPSGSFATSVVRELLSQDHSNTVDMTE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacattgagtgaattacattggctgtttggtaaaccggaagcaacggggattgtcaaa
gccacgccagaagattttattgttcgcgaagatttggggttttcccctgagggagaaggt
gaacacttaatggtacatatccgtaaaacgggctgtaatacccaatttgtcgcggatcac
cttgcccgttttgccaaaatcccggcgcgcgctgtcagttatgcgggattaaaagaccgc
aatgcggttacggaacagtggttttgcctgcatttaccgggaaaacagacgccggattta
gcagcatttcaactggaaggttgtgaagtgttggccgtgactcgccaaaaacgtaagcta
cggattggggcattgaaagggaatgatttcacgttagtattaagagaaatctctgatcga
caatgggtggaaaaacgcttgcagcaaatcgcccacgctggtgtacccaattactttggt
gaacagcgttttgggcgggatggtcaaaatttggttcaggctcagcgttgggcggccaat
gaaatccatgttaaagagcgtaaccgtcgtagtttttacctttcagcctgccgtagtgcc
atgtttaatgctatcaccagtacacgcatcgcccagcatgaacatcaacaggtaaaaaag
ggagatgcattacaattaacagggcgcggtagctggtttgtggcggatgaggctgaatta
tctgccttacagcagcgagtcatggcaggtgagttacagataacggcgcctttaccgggt
gacaatgcattgggaacgcaacatcaggcgttggattttgaacaacaatgcttattggat
tatgaaccgctttgggcattggtcaaacgtgaacgggtggaaagcagtcgccgggcaatg
ttagtgaaaccgcttaacctgcgttgggactggcgtgatgatcaaaccgttattctccat
ttttctctgccatcagggagttttgcaaccagtgttgtcagggaactgctcagtcaggat
cacagtaatactgtggatatgacggaataa
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