Xenorhabdus poinarii: XPG1_2868
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Entry
XPG1_2868 CDS
T03805
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XPG1_2868 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpo03019
]
XPG1_2868 (groL)
03110 Chaperones and folding catalysts [BR:
xpo03110
]
XPG1_2868 (groL)
03029 Mitochondrial biogenesis [BR:
xpo03029
]
XPG1_2868 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xpo04147
]
XPG1_2868 (groL)
Enzymes [BR:
xpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XPG1_2868 (groL)
Messenger RNA biogenesis [BR:
xpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XPG1_2868 (groL)
Chaperones and folding catalysts [BR:
xpo03110
]
Heat shock proteins
HSP60 / Chaperonin
XPG1_2868 (groL)
Mitochondrial biogenesis [BR:
xpo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XPG1_2868 (groL)
Exosome [BR:
xpo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XPG1_2868 (groL)
Exosomal proteins of other body fluids (saliva and urine)
XPG1_2868 (groL)
Exosomal proteins of breast cancer cells
XPG1_2868 (groL)
Exosomal proteins of colorectal cancer cells
XPG1_2868 (groL)
Exosomal proteins of bladder cancer cells
XPG1_2868 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CDG22515
UniProt:
A0A068R8P0
LinkDB
All DBs
Position
complement(2781942..2783588)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARNKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVISAVEELKKLSVPCSDSTAIAQVGTISANADETVGKLIAEAMDKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGV
AKASKPLIIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTNGTV
ISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEESAIAARVTQIRQQIEESTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGVALV
RVASAIANLTGDNEDQNVGIRVALRAMEAPMRQIVDNAGEEPSVVVNNVKAGKDNYGYNA
ATEQYGDMIEMGILDPTKVTRSALQFAASIAGLMITTEAMVTELPKDDKADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaatgatgctcgcaacaaaatgctacgtggtgtg
aatgtactagctgatgcggttaaagtgaccctggggcctaaaggtcgtaacgttgttttg
gataaatctttcggtgcgcctgttatcactaaagacggtgtgtctgtagctcgtgaaatc
gaattggaagacaaattcgagaacatgggtgctcagatggttaaagaagttgcttctaaa
gccaatgacgcagcgggtgatggtactacgacagcaaccgtactggctcagtctatcgtc
accgaaggtctgaaagctgttgctgctggcatgaacccaatggatctgaagcgaggtatc
gataaagcagtgatttcagccgttgaagaactgaaaaaactgtccgtaccttgttctgat
tccaccgctattgcacaggttggtactatctctgcaaacgccgacgaaacagtaggtaaa
ctgatcgcagaagcgatggacaaagttggcaaagaaggtgtcatcaccgttgaagaaggt
actggtctggaagacgaactggatgttgttgaaggtatgcagttcgaccgtggttacctg
tctccttatttcatcaacaaaccagaatcaggttctgttgaactggaaaacccctacatc
ctgttggttgacaagaaaatttctaacatccgtgaactgttgccagttctggaaggtgtc
gctaaggcaagcaagcctttgatcatcgtcgctgaagatgttgaaggtgaagcgctggca
actctggttgtcaacaatatgcgtggtatcgtgaaagtggctgcggtgaaagcacctggt
ttcggcgatcgtcgtaaagccatgctgcaagatatcgcgacgctgaccaacggtactgtt
atttctgaagagatcggtctggagctggaaaaagcaactctggaagatctgggtcaggca
aaacgcgttgttatcaacaaagacaccacaaccattattgatggcgttggtgaagaaagc
gcaattgctgcacgtgtgactcaaatccgtcagcaaattgaagaatcaacttctgactat
gaccgcgaaaaactgcaagagcgtgtggctaaactggcaggcggtgttgctgtcattaaa
gtgggtgcagcaactgaagttgaaatgaaagaaaaacgcgctcgcgttgacgatgcactg
catgcaactcgtgcggctgtagaagaaggcgttgttgcgggtggtggtgttgctttggtt
cgtgtcgctagcgctatcgctaacctgaccggtgacaatgaagatcagaacgtaggtatc
cgtgttgcactgcgtgccatggaagcgccaatgcgtcagatcgtagacaacgcgggtgaa
gagccatctgttgttgttaacaatgtgaaagcaggtaaagacaactacggttataacgct
gcaactgaacagtacggcgatatgatcgaaatgggtatcctggatccaactaaagtgact
cgttctgcattgcagttcgcagcttctatcgcgggtctgatgatcacgactgaagccatg
gtgactgagctacctaaagatgacaaagcagacttaggtgctgctggtggcatgggcggc
atgggtggtatgggcggcatgatgtaa
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