Xenorhabdus poinarii: XPG1_2953
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Entry
XPG1_2953 CDS
T03805
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03030
DNA replication
xpo03430
Mismatch repair
xpo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XPG1_2953 (dnaE)
03430 Mismatch repair
XPG1_2953 (dnaE)
03440 Homologous recombination
XPG1_2953 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpo03032
]
XPG1_2953 (dnaE)
03400 DNA repair and recombination proteins [BR:
xpo03400
]
XPG1_2953 (dnaE)
Enzymes [BR:
xpo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XPG1_2953 (dnaE)
DNA replication proteins [BR:
xpo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XPG1_2953 (dnaE)
DNA repair and recombination proteins [BR:
xpo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XPG1_2953 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CDG22600
UniProt:
A0A068R8X2
LinkDB
All DBs
Position
complement(2854170..2857652)
Genome browser
AA seq
1160 aa
AA seq
DB search
MTEPRFVHLRVHSDYSMIDGLAKTGSLVKKIAKLGMPAFAITDFTNLCGLVKFYGSAHNA
GIKPIIGADFYVENELLGDEYAHLTILARNNEGYQNLTLLISEAYQNGYGAVGPTIKREW
LVKHKAGLLLLSGGRMGDVGKFLLRGNRAMAEQCLHFYQEHFPDSYYLELIRTGRPDEET
YLHAAVALAIDNNLPVVATNDVCFLESDDFDAHEIRVAIHDGYTLVDPKRPKNYSPQQYL
RSEQEMCELFSDIPEALQNSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLIEKSRQGL
EARLAFLYPDPEIRAQKRQEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALNITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFVAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPIYCDPEGQNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMVNARRASKKQAPIDIAAIPLDDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKQGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARQKGGHFKELFDLCARVDIKKINRRVMEKLIMSGAFDRLGPHRAALMS
SLEDALKAADQHAKAEAIGQADMFGVLTEEPEQVERSYASTPKWPDQVVLDGERETLGLY
LTGHPITGYLKEIERYTNGLRLKDVNPTPRGQVATVVGLVLASKIVTTKRGNRIGISTLD
DRSGRLEIMLFSDALERYQHLLEQDKILIATGQVSFDDFSGGLKMTVRELMDISEAREKF
ARGLAISLSDRQIDEQLLNRLRDALAPHRSGTIPVHLYYQRVDARARLRFGATWRVTPTD
TLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccacgttttgtgcacttacgtgttcacagtgattattcaatgatcgatggc
ctggcgaagacaggctcgttggtaaaaaaaatcgctaaattgggtatgcccgcttttgcg
attacggattttaccaatttgtgtggattggtgaaattctatggcagtgcccataatgcc
ggtatcaagcccattattggggctgatttttatgtggaaaatgaattattgggcgatgaa
tatgcccatctgacgatccttgcccgtaataacgaaggctatcaaaacctgaccttgctc
atctctgaggcttaccaaaacggctatggtgcggttggcccgaccattaaacgggaatgg
ctggtaaaacacaaagccggattgctcctgctgtcaggcgggcgtatgggtgatgtgggc
aaattcctgttgcgtggcaatcgtgcaatggcggagcaatgtctccatttttatcaggaa
cattttccagacagttattaccttgaattgattcgtaccggacgcccggacgaagaaact
taccttcatgcagccgtagcactggccatagataacaatctgcccgttgttgccaccaat
gatgtctgttttctggaaagcgatgattttgacgcccatgagattcgggttgctatccat
gatgggtatacactggttgatcctaaacgccctaaaaattacagccctcagcaatatcta
cgcagtgaacaggaaatgtgcgagcttttttcagacattcctgaggcactacaaaatagc
gtagaaattgctaaacgctgtaacgtcacgatccgtcttggtgaatattttctgccgcag
tttccgacaggcgatatgagtacggaagatttcctcattgaaaaatccaggcaagggttg
gaagcgcgcctggcgttcctgtatcccgatccggaaattagggcacaaaaacgtcaggaa
tatgatgagcgtctcgatattgaattgaacgttatcaaccagatgggattccctggctac
ttcctgattgtgatggagtttatccagtggtcgaaagacaacggtgttcctgtcggcccg
ggacgtggatcgggtgccggttcgcttgtggcttacgcgttgaatatcacggatctcgat
ccgctggaattcgatctgctgtttgaacgtttccttaaccctgaacgtgtttcgatgccc
gactttgatgtcgatttctgtatggaaaaacgcgatctggttatcgatcacgtggcagac
atgtacggaagagatgcggtatcgcagattatcacgtttggtacgatggcagcgaaagcc
gttatccgcgacgtcgggcgtgtgctcgggcatccatatgggtttgttgatcgcatatca
aaactggtgcctcctgatcccggcatgacgctggaaaaagcgtttgttgctgagccacaa
ctgcctgaaatttacgaagcagacgaagaagtgaaggcgctgattgatatggcgcgcaaa
ctggagggggtcacgcgtaacgcgggtaaacatgcgggtggggtggtgatcgcgccaacc
aaaattactgactttgcaccgatctactgtgatccagaagggcaaaacccggttactcag
tttgataagaatgatgtggaatatgcggggctggtgaagtttgacttcctaggtctgaga
accctgaccatcatcaactgggcgctggagatggtgaatgcccgtcgtgccagcaaaaaa
caggcgccgattgatatcgcggctattccgctggatgatcagaaaagttttgatatgctg
caacgttctgaaacgacggctgtcttccagcttgaatcccgcgggatgaaggatttgatc
aaacgcctgcgccctgactgttttgaagacatgatcgcattggtggcactatttcgccct
gggccactgcaatccggcatggtagataactttattgaccgtaaacatggacgggaagaa
atttcctacccggatgttgaatggcagcatgaatccttaaaacccgtgttggaaccgact
tacggcatcatcttgtatcaggaacaagtgatgcagattgcacaagttctggcggggtat
acgctgggtggtgcagatatgctccgccgggcaatgggaaagaaaaagccagaggagatg
gcgaaacagcgatccgtatttgaagagggggcgataaaacagggtgttgatggcgaactc
gcgatgaaaatcttcgatttagtggagaaattcgcgggttatggcttcaataaatcgcac
tccgccgcttatgccctggtttcttatcagaccttatggctgaaagcgcactatccggca
gaatttatggcggctgtgatgacggcggatatggacaatacggaaaaagtcgttggcctg
gtggatgaatgctggcgcatggggcttaaagtgttgccccccgatattaatagcggcttg
tatcattttcatgtcaatgatgatggcgagattgtttatggtatcggggcgattaaaggt
gtcggtgaagggccgattgaagcgataattgaagcccggcagaaagggggacactttaag
gaactgtttgacctgtgcgcacgcgttgatatcaaaaaaataaaccgccgggtgatggaa
aaactgatcatgtccggtgcttttgaccgattgggaccgcaccgtgcagcgctgatgtcc
tctctggaagatgcattgaaagccgcggatcaacatgctaaagccgaagcgatcggtcaa
gcggatatgtttggcgtgttgacggaggagccggaacaggttgaacgctcctatgccagt
acaccgaaatggccagatcaagtggttttggatggtgagcgagaaacgctgggtttgtat
ttaaccggacatccgatcacaggctatttaaaagaaattgaacgttatacgaatggattg
cgtctaaaagatgtcaatccgacgcctcgaggacaagtagcgactgtggtcggtttggtg
ttagcgtccaaaatagtgacaaccaaacggggaaaccggattggtatcagtacattggat
gatcgttcaggacgcctggagattatgctattttctgatgcgttggaaaggtatcagcat
ttattagaacaggacaaaattttgattgctaccggacaagtcagctttgatgacttcagc
ggtgggcttaaaatgaccgttcgtgaactaatggatatcagcgaggcgcgtgaaaaattt
gcacgtgggcttgcgatctcattatcagacaggcaaattgatgagcaattattgaaccgt
cttcgtgatgcattagcgccacatcgttcaggtacgataccggttcatctttattaccaa
cgggtcgatgcccgcgcccgtttacgatttggtgcaacatggcgggtaacgccaacagac
acccttttgacagatttgcgaactctgctgggtaatgagcaggtagaattagaatttgac
tag
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