Xenorhabdus poinarii: XPG1_3374
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Entry
XPG1_3374 CDS
T03805
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
xpo
Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xpo03021
]
XPG1_3374 (rapA)
Transcription machinery [BR:
xpo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
XPG1_3374 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
COG2_N
Motif
Other DBs
NCBI-ProteinID:
CDG23010
UniProt:
A0A068R9X4
LinkDB
All DBs
Position
3309152..3312061
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AA seq
969 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNVGDT
VTSHDGWKLKIDDVQQDNNLLIYVGTRLDTEEENVCLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKHQSEQFRLAESGLRGIRASLIPHQLHIANEVGKRHAPRVLLADEVG
LGKTIEAGMIIHQQLMAGRAERVLIIVPESLQHQWLVEMLRRFNLRFSLFDDGRYSEALL
DSDNPFETEQWVICSLDFVRRNKQRFELLLEASWDLMVVDEAHHLAWSEKSPSREYQVIE
QLAEQIPAVLLLTATPEQLGQESHFARLRLLDPNRFHDYQSFIDEQQQYRPVADSVTLLL
SGETLNNDQQNAIVELISEQDIEPRLKAANSHQGEESENARRELITMLMDRHGTSRLLFR
NTRSGVKGFPHRELREIKLPLPAQYQTAIKVSEIMGAKKTVEARAKDMLYPERIYQEFEG
ENATWWNFDPRVEWLMGFLMANRDEKVLVICAKAETALQLEQVLREREGIRSAVFHEGLS
LLERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDR
IGQNRDINISVPYLENTAQSILLRWYHEGLDAFEHTCPTGRAIYDKYYETLLNFLAKPNV
QTGFNEFIIECREHHEKLKQQLEQGRDRLLEMNSNGGEQGQKLAEKIAAQDNDTDLVNFS
LNLFDIIGINQEDRCDNIIALHPSDHMLVPDFPGLPKDGCSITFDREKALSREDTQFLSW
EHPIIRNGLDLILSGDTGSCAVSILKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPT
PVRLLLDLKGTNLAPQVEFESFNRQLNAINRHNASKLVNAVQKEVHTILQLSESLVEEQA
RALIEKAKKEADDVLSAELSRLEALKAVNPNIRDDELAATEAEHKHLLLNLDQANWRLDA
IRLVVVSHQ
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccatttactcttggtcaacgctggataagcgatacagaaagcgaacttggattaggt
accgtcgtcgcgcttgatgcgcgtatggtgacgttacttttccctgccagcggagaaaac
cgtctttacgcacgcaatgattcacccattacccgcgttatgtttaatgtaggcgatacg
gtgaccagtcacgatggctggaagctcaagattgacgatgttcagcaagataataacctg
ctgatctatgtcggtactcgtctggacactgaagaagaaaatgtctgcttacgggaagtt
ttcctggatagcaagctaacgtttaataagccacaagatcgcctgttcgcggggcaaata
gaccgaatggatcgctttgctttgcgttttcgcgcccgtaaacaccaaagtgagcagttc
cgtctggcagaaagcggcctgcgtggtattcgtgccagtttgatccctcaccaattacac
attgctaatgaggtaggtaaacgtcacgcacctcgtgtattgctggcagatgaagtgggg
ttgggtaagaccattgaggcggggatgattatccatcagcaattaatggccggacgcgca
gagcgggtattaatcattgtgccagaaagcctgcaacatcaatggctggtagaaatgctg
cgccgttttaatctgcgtttttcgctgtttgatgatggccgctacagcgaagcgttgctt
gacagtgacaatccattcgaaacagagcaatgggtgatctgttccctggattttgttcgc
cgcaataaacaacgttttgaactgctgctggaagccagttgggatttgatggtcgtcgat
gaggctcaccatctggcatggagcgaaaaatcccccagccgtgaatatcaggtgattgaa
caattggcagaacaaattccggccgtcttgctactgaccgcgacgccagagcagttggga
caggaaagccactttgcccgtctgcgcctgctagatcccaaccgtttccatgattatcag
tcgtttattgatgaacagcaacaatatcgcccggtggcagattccgtcacgctgctgtta
tccggtgaaacactgaataatgatcaacaaaatgcgattgtcgaattgatcagtgaacaa
gatattgaaccacggctgaaagcggcaaacagtcatcaaggtgaagaaagcgaaaatgcc
cgccgtgaattgatcactatgctgatggatcgccacggcaccagccgattgcttttccgc
aatacccgtagtggcgtgaaaggcttcccacaccgtgaattacgtgagatcaagttaccc
ttgcccgcgcagtatcaaacggcaatcaaggtttctgaaatcatgggagccaaaaaaacc
gtagaggcgcgcgccaaagatatgctctatcctgagcggatctatcaggaatttgaaggg
gaaaacgcgacatggtggaatttcgatccccgcgtagaatggctgatgggtttcttgatg
gcaaaccgcgatgagaaagtgctggtgatctgtgccaaagcagaaacggcactgcaacta
gagcaagtgttgcgtgaacgcgaaggtatccgcagtgcagtgttccacgaggggctatcc
ctgctagaacgtgaccgggcggcggcttactttgcgtctgaagaagaaggggcacaggta
ctactctgttctgaaattggttcagaagggcgtaacttccagtttgctaaccaactggtc
atgtttgatttgccattcaacccggatttgctggaacagcgtatcggccgtctggatcgt
atcggtcagaaccgcgatatcaacatcagtgtgccttatctggaaaataccgcgcaatcc
attctcctgcgctggtatcacgaagggttggatgcgtttgaacatacgtgcccaactggc
cgcgccatctatgataaatattatgaaaccctgctgaatttccttgccaaacccaatgtg
caaaccggattcaatgaatttatcatcgagtgtcgcgagcatcatgaaaagctcaaacag
caattggaacaagggcgtgaccgcctgttggaaatgaattctaacgggggtgaacaaggc
cagaaactggctgaaaagattgcggcacaggataatgatacggatctggtgaatttttcc
ctgaatttgttcgatattattggtatcaatcaggaagatcgctgcgacaatattattgcc
ctgcatccctccgatcatatgctggtgcctgatttcccagggttacccaaagatggctgt
tctatcacatttgaccgcgaaaaagccctatcccgcgaagatactcagttcctgagctgg
gaacatccgatcatccgtaatgggctggatttgatactgtcaggggataccggcagttgt
gccgtttctattctgaaaaacaaagcattacccgtcggtactttgttggttgaactgatt
tatgtggtggaagctcaggcaccgaagcatctgcaattgacccgtttcttaccaccaacg
ccagtgcggctgttgctggatttgaaaggcaccaacctggctccgcaggtcgagtttgaa
agtttcaaccgccagctcaatgcgattaaccgtcacaatgccagcaagctggtcaatgcg
gtacagaaagaagtgcatactattttgcagttatcggaatcactggtggaagaacaagca
agagcgttgattgaaaaggcgaagaaagaggctgatgatgtgctgtcagctgaattatca
cgtctggaagcgctgaaagcggttaaccctaatatccgtgatgatgagttagcagcgact
gaagccgagcataagcatctgctacttaatcttgaccaggctaactggcgtctggatgcc
attcgtttggtggttgtttctcatcaataa
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