Xenorhabdus poinarii: XPG1_3387
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Entry
XPG1_3387 CDS
T03805
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xpo
Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpo03016
]
XPG1_3387 (truB)
Enzymes [BR:
xpo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XPG1_3387 (truB)
Transfer RNA biogenesis [BR:
xpo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XPG1_3387 (truB)
Prokaryotic type
XPG1_3387 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TPR_CcmH_CycH
Motif
Other DBs
NCBI-ProteinID:
CDG23023
UniProt:
A0A068R725
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All DBs
Position
complement(3327082..3328023)
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AA seq
313 aa
AA seq
DB search
MGRRRRGRAIHGVLLLDKPQDISSNDALQKVRRIFNASKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIARLGQRTDTSDSHGVIISEREVNITSPQLDAALDTFRGDTMQ
VPSMYSALKHQGKPLYEYARQGIEVEREARPITVYELQFIRWEGNELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPNQRMVTLEQLHALKQQADNQAIEAWELLDPLL
LPMDTAVTHFPAIHLTSVVASYFKQGQPVRSKHDLSSNEWVRVTEGDENKFIGIAVIDDD
GLVAPRRLVVETE
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccgtcgtagaggccgtgcgatacacggtgtactgttgctggataagcctcag
gatatttcctccaatgatgcgttacagaaagtcaggcggattttcaatgccagcaaggcg
ggtcatacgggtgcattagatccattagcaacgggcatgttaccgatttgtcttggtgaa
gcgaccaaattttcccaatttttgctggattctgataaacgctaccgtgtgatagctcgt
ttggggcagcgtacagatacttcggactcacatggagtcatcataagtgaacgcgaagtc
aacatcacctcccctcagcttgatgcagcattggatacatttcgtggggacaccatgcag
gttccttccatgtattctgccttgaaacatcagggaaaaccgctctatgaatatgcccgt
caggggattgaagttgagcgtgaagcacgtcctatcactgtttatgaattgcagttcatt
cgttgggaaggcaatgagctggaattggaaatacactgttccaagggaacttacattcgc
actatcattgatgacttaggcgaactgttgggttgtggtgcgcatgtcatttacctgcgt
cgtttgcaggttgccaattaccccaatcaaagaatggtcacgttggaacagttacatgca
ttgaaacaacaagcggataatcaagcgattgaagcgtgggaattgcttgatccactgttg
ttgcctatggatacggcagtgactcattttcctgccattcatttaacctcggtggttgcg
tcttattttaaacaaggccagccagtgcgaagcaaacatgatttgtcttccaatgaatgg
gtcagggtcaccgaaggcgatgaaaataaattcatcggtattgcggtcattgatgatgat
ggcttagtggcaccacgccgtctggttgttgaaaccgaataa
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