Xenorhabdus poinarii: XPG1_3450
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Entry
XPG1_3450 CDS
T03805
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xpo
Xenorhabdus poinarii
Pathway
xpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XPG1_3450 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpo03019
]
XPG1_3450 (recQ)
03400 DNA repair and recombination proteins [BR:
xpo03400
]
XPG1_3450 (recQ)
Enzymes [BR:
xpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XPG1_3450 (recQ)
Messenger RNA biogenesis [BR:
xpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XPG1_3450 (recQ)
DNA repair and recombination proteins [BR:
xpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XPG1_3450 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
EcoEI_R_C
Cas3-like_C_2
zf-CXXC
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
CDG23086
UniProt:
A0A068R826
LinkDB
All DBs
Position
complement(3401438..3403264)
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AA seq
608 aa
AA seq
DB search
MSTAELISTASRAEQALRKTFGYQQFRPGQQQVINAVLDGRDCLVVMPTGGGKSLCYQIP
ALVKNGLTLVVSPLISLMKDQVDQLRANGVEAECLNSTQRREQQVDIMQRCRQGMIKLLY
IAPERLVTDNFLEQLHGWQPVLLAVDEAHCISQWGHDFRPEYRALGQLRHHFPHLPVIAL
TATADKTTRQDIVRLLALREPIIHISSFDRPNIRYTLVEKYKPLDQLWSFVRGQQGKSGI
IYCNSRNKVEDTAERLQKRGLSVAPYHAGLENNQRAWVQDAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAVLFYDPADMAWLRRCLEEKPAGEQ
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGESRQTACGNCDICLDPPKRYDGLVEAQKAL
SCIYRVGQRFGVGYIVDVLRGANNQRIREFGHDKLPVYGIGKAQSQEHWMSVLRQLIHLG
LIQQNIANYSALQLTEAARPVLRGEVPLPLAVPRIQNLKSRNQQNKSYSGNYDRKLFAKL
RKLRKSIADENNIPPFVVFNDVTLIEMAEQCPITPDELLLINGVGQRKLERFGEAFMTLI
REHFDEVE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgcagaactcatcagcacggcatcgcgggctgaacaagcattacgaaaaaca
ttcggataccagcaatttcggccaggacagcagcaagtgattaacgccgtgcttgacggg
cgtgattgcctggttgttatgccaacgggaggcggtaaatcgctgtgctaccagatcccc
gcgttggttaaaaatgggctgacgctggttgtctctccattaatctcattgatgaaagat
caagttgatcaactccgggcgaatggcgttgaagcggagtgcctgaactcaacccaacgc
cgtgaacagcaagttgatattatgcaacgttgccgccaggggatgattaaactgctttat
attgccccagaacggttggtcacggataattttctggagcaacttcacggctggcagcct
gttttactggctgttgatgaagcgcattgtatttctcaatgggggcatgactttcgccca
gaatatcgtgcgctagggcaacttcgccaccatttcccccatcttcccgtcattgcctta
accgcgacggcagataaaacgacccgtcaggatatcgtgcgtttattggcgttgcgtgag
ccgattattcatatcagcagctttgatcgtcctaacattcgctacacgttagtcgagaaa
tacaaacctcttgatcagctttggtcatttgtccgtggtcagcagggaaaaagtggcatt
atttactgtaatagccgcaataaagtggaagacacggcggagcgtttgcaaaaacggggg
ttaagtgttgccccttatcatgccggactagaaaacaatcaacgtgcgtgggtacaagat
gccttccagcgggatgatttgcagattgttgtagcaaccgttgcctttgggatgggaata
aacaaacctaacgtgcgttttgtcgtgcactttgatattccccgtaatatcgaatcctat
tatcaagaaaccggccgtgcagggcgggatggcttacctgccgaagcggtattgttttac
gatcctgcggatatggcgtggctgcgtcgttgcctggaagagaaaccggcgggtgaacag
caggatattgaacgacataaactgaatgcgatgggggcatttgctgaagcgcagacttgc
aggcgtttggtgttgctgaattattttggtgaaagtcgtcaaacagcgtgtggcaattgt
gatatttgccttgatccccccaaacggtatgacggtttggtcgaggctcagaaagcgctg
tcctgcatctatcgtgttggacagcgtttcggggttggttatattgtcgacgtgctacga
ggggcaaataatcaacgcattagagaatttgggcatgacaagctgcctgtctacggcatt
ggtaaagcacagagccaggaacattggatgagcgtcttgcgtcagctcattcatttgggg
ctgattcagcaaaacattgctaactattcagccctgcaactgacagaagcggcgcggcca
gtcttgcgcggtgaagtccctttaccactggctgtaccacgcatccaaaacttgaaaagc
cgcaatcagcaaaacaaatcatacagtgggaactatgatcgtaaattgtttgccaagttg
cgcaaattgcgtaaatccattgctgatgaaaataacattcccccgtttgtcgttttcaat
gacgtgacattaattgaaatggcagaacagtgtccgataacaccggatgagctgttgcta
attaacggtgttgggcagaggaaattagaacgctttggggaggcgtttatgacattaatt
cgtgagcattttgacgaggttgaataa
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