Xanthomonas prunicola: MUG10_01410
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Entry
MUG10_01410 CDS
T08368
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xpr
Xanthomonas prunicola
Pathway
xpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MUG10_01410 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpr03400
]
MUG10_01410 (sbcB)
Enzymes [BR:
xpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
MUG10_01410 (sbcB)
DNA repair and recombination proteins [BR:
xpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MUG10_01410 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MUG10_01410 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MUG10_01410 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
USJ00950
LinkDB
All DBs
Position
280996..282441
Genome browser
AA seq
481 aa
AA seq
DB search
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV
TGITPQHALREGVTEAEAFARIAEQMSRPQTCTLGYNSIRFDDEFVRCGLFRNFYDPYER
EWRGGNSRWDLLDVLRMVHALRPDGIVWPQREDGATSFKLEHLANANEVREGDAHEALSD
VYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQRYPASRMCAAAV
LPLTRHPRIDSRVIVFDLEGDADVLLRLSPDEIADRLYIRAADLPEGEQRIPLKEVHLNK
SPALVAWQHLRVADFERLGVDHDAVLAKAARLRELGPALAEKVRQVYGSERAPAAATNDA
DASLYDGFLAEGDKRLLAHVRASAPAELGALEARFRDPRLIELLFRYRARNWPQTLSFEE
QERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRLAHPDDATKQALLDQLAAWGLDLQRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacagctttctcttctacgacctggaaaccttcggccaggacccgcgccgcacc
cgcatcgcacagttcgccgcggtgcgtaccgacgcgcaactgcgcgtgatcgaagagcca
atcagcttcttcgtgcaaccggccgacgatctgctgccctcgccctacgccaccatggtc
accggcatcacgccgcaacatgcgttgcgcgaaggcgtcaccgaggccgaggcgttcgcg
cgcatcgccgaacagatgagccgcccgcagacctgtacgctgggctacaactcgatccgc
ttcgacgacgagttcgtccgctgcggcctgttccgcaatttttacgacccttacgagcgg
gagtggcgcggcggaaactcgcgctgggatctgctggatgtgctgcggatggtgcatgcg
ctgcgtccggacggcatcgtctggccgcagcgcgaagacggcgccacctcgttcaaactg
gagcacctggccaacgccaacgaggtacgcgaaggcgatgcgcacgaagcgctgtcggac
gtctacgccaccatcggcatggcgcgcaaattccagcaacatcagccaaaactgtgggac
tacgcgctgcgcttgcgcgacaagcgctttgccgccacgttgctggacgtcatcgccatg
cagccggtgctgcatatctcgcagcgttaccccgcctcgcgcatgtgcgccgcggcggta
ctgccgctgacgcgccatccgcgcatcgatagccgcgtgatcgtgttcgatctggaaggc
gacgcggacgtcctgttgcggctaagccccgacgagatcgccgaccgtctgtatatccgc
gctgcagatctgccggaaggcgagcagcgtattccactgaaagaagtacatctgaacaag
tcgcctgcgctggtggcctggcagcatctgcgcgttgcggattttgagcgtctgggtgtg
gatcacgacgcggtactggccaaggcggcacggttgcgcgaattgggccctgcgcttgca
gaaaaggtgcgccaggtttatggcagcgagcgcgcacctgcggcagcgaccaacgatgcc
gacgcctcgctctacgatggcttcctggccgaaggcgacaagcgtctgctggcacacgtc
cgtgccagcgcaccggccgaactgggcgcactggaggcgcgctttcgcgacccgcgcctg
atcgaactgctgttccgctaccgcgcgcgcaactggccgcagacactgtcgttcgaggaa
caggagcgctggaacgtctatcgccgccagcgcctgctcgaagaccgcggcctgggcgag
gtcaccttggagcagtaccacgcgcagatcgcggatttacggcttgctcaccccgacgat
gctaccaagcaagccctactcgaccagctcgccgcctggggtttggacctccaacgcacg
ctatga
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