Xanthomonas prunicola: MUG10_02675
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Entry
MUG10_02675 CDS
T08368
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xpr
Xanthomonas prunicola
Pathway
xpr03030
DNA replication
xpr03430
Mismatch repair
xpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUG10_02675 (dnaE)
03430 Mismatch repair
MUG10_02675 (dnaE)
03440 Homologous recombination
MUG10_02675 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpr03032
]
MUG10_02675 (dnaE)
03400 DNA repair and recombination proteins [BR:
xpr03400
]
MUG10_02675 (dnaE)
Enzymes [BR:
xpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MUG10_02675 (dnaE)
DNA replication proteins [BR:
xpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MUG10_02675 (dnaE)
DNA repair and recombination proteins [BR:
xpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MUG10_02675 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
USJ01163
LinkDB
All DBs
Position
558476..562072
Genome browser
AA seq
1198 aa
AA seq
DB search
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDMPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVMIATPDMAPWRMTLLCRDREGYLSLSRLLTRAWLEG
HRPEGGVAIHPEWLQAGHANLFALTGRDSLAGRLFSEGRADLAEQQLADWQRVFGDGLHL
ELTRTGREDEERFNQFALHTAGVRGLPVVASNDVRFLYASDFNAHEARVCISSGRVLDDP
KRPRDYSDQQYMKSSEEMAALFADLPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPEDET
LDSWIRSQSRDGLAARLEKNPIAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFTYGLVDSVAKLIPNILGIT
LKDAMGEGKDSEMASPDLIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPDPLS
EFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITTIPLDDVPTYKGVFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMVYQEQVMQMAQIVGDYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEA
ASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTAKLNRRTLEAMINA
GAMDGLGSNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWP
LGQLLTGERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGGSGGGGGGDGE
KRAWRPEVSAILAGQVIGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRIL
IVKGGLREDEFNGGYSLRIRQCWDYEQICADHAQRLSLRLDLREKQAFKRIDALLAKHRP
GKTPLRLDLLLRAPSGGVAGMLDLNGGHSVRIDQHLMDSLRADPAVRTLKIKYNPPWA
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgtttcgtccatctgcacgtccacaccgagttctcgctggcggattcc
accatccgtgtgcccgagaaaccggatcaggctgacccgaaaaaggccaagcaggccaac
ctgctgagccgggcagtcgaactcgacatgcccgcgttggcagtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgaaggcgtcggcatcaagccgatcgcc
ggcgccgatgtgatgatcgccacgccggacatggcgccctggcgcatgaccctgctgtgc
cgcgaccgcgagggctacctgagcctgtcgcggctgctcacgcgcgcctggttggaaggc
caccgccccgaaggcggcgtggcgatccatccggaatggctgcaggccgggcacgccaac
ctgtttgccctgaccggccgcgacagcttggcgggccgtctgttttccgagggtcgcgcc
gacctggccgagcaacagctggccgactggcagcgcgtgttcggcgatggcctgcatctg
gagctgacccgcaccgggcgcgaggacgaggaacgcttcaaccagttcgccctgcatacc
gccggcgtgcgcggcctgccggtggtggccagcaacgatgtgcgctttctctacgccagc
gacttcaatgcacacgaagcgcgtgtgtgtatttcgtcgggccgcgtgctcgacgacccc
aagcgcccgcgcgactacagcgaccagcaatacatgaagtccagcgaggagatggcggca
ctgttcgccgacctccccgatgcgatcgacaacacccacgcgctggcgcagcgctgcaac
atcgagatgcgcctgggcacctacttcctgcccgcctacccggtgccggaagacgagacg
ctggacagctggatccgcagccagtcgcgcgacggtctggccgcgcgcctggaaaagaac
ccgatcgcgcccggcaagacccgccaggactacgtcgaccggctcgaattcgagctggac
accatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggcccgggccgcggttccggtgccggctcgctggtg
gcctgggcgctgcagatcaccgacctggatccgctgccgtacaacctgctgttcgagcgc
ttcttgaacccagagcgcgtgtcgatgcccgacttcgacatcgacttctgcatggatcgc
cgcgacgaagtcatcgactacgtggcgcgcaagtacggccgcgagcgggtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgacgccgggcgcgtgctcggc
ttcacgtacggattggtcgacagcgtcgccaagctgatccccaacatcctgggcatcacg
ctcaaggatgcgatgggcgaaggcaaggattcggagatggcctcgccggacctgatccag
cgctatcaggtcgaagacgacgtgcgcgacctgatggacctggcccgccagctcgaagac
ctcacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgccagatccgctgtcc
gagttctgcccgctgttcgccgaacacgacgaagacgggcgcggcaagaatccggtcacc
cagttcgacaaggacgacgtcgaagcggtgggcctggtgaagttcgacttcctcggcctg
cgcacgctgaccatcatcgattgggcggtcaaggcgatcaacgtgcgccacgcgcgcgcc
ggcatcgacccggtcgacatcaccaccattccgctcgacgatgtgcccacctacaagggc
gtgttcgcctcaggtaataccggcgcggtgttccagttcgaatcctcgggcatgcgccgc
ctgctcaaggacgcgcgcccggaccgtttcgaagacctgatcgcgctggtgtcgctgtac
cgcccaggcccgatggacctgatcccggacttcaacgcgcgcaagcacggccagcaggag
atcgtgtatccggacccgcgcaccgaagtcatcctgaaagacacctacggcatcatggtg
taccaggaacaggtgatgcagatggcgcagatcgtcggcgattattcgctgggcggcgcc
gacctgctgcgccgcgcgatgggcaagaaggtgccggccgaaatggccaagcaccgcgag
atcttccgcgaaggcgcggccaagggcggggtaagcgcggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcctggctgaaacggcattacccggccgaattcatggccgcg
acgttgtcctcggacatggacaacaccgacaaggtggtcggctttctcgatgaggtgcgc
aacctcggcctcaccgtcaagccgccgcgcgtcaacgagtcggcctacatgttcgaggcg
gccagcccggacacgattcaatacggcctgggcgcgatcaagggcgtcggccagggtgcc
tgcgaggcgatcgtcgaagaacgccagcgcggcggcccgtacaccacgctgctggatttc
tgcacccgtgtgggcaccgcaaagctcaaccgccgcacgctggaagcgatgatcaacgcc
ggcgcgatggatgggctgggcagcaaccgcgcctcgctgatgctgcaattgcccgaagtg
atgaaggccaccgagcagatggcgcgcgaacgcgcctcggggcagaactcgctgttcggc
gggccggatccgagcgccccggcgatgcgcctggacctacccgaaagcaaggaatggccg
ctgggccaattgctcaccggcgagcgtgaaacgctgggcttctacctcagtggccacccg
ttcgacccgcaccgcgaagaagtccgcgaactggtcggctgcgacctgggcgcactggaa
aagatcctggcttcgcaacagcgcggcggcagtggtggtggtggtggtggcgatggcgaa
aaacgcgcctggcgcccggaagtcagtgccattctggccggccaggtgatcggcgtgcgc
cgcaagggcgacagccaggtgttcgtgcaactcgaagacggccgtggccgggtcgaatgc
agcgcgttctccgatgcgatggccgagttcgggcatctgctgacccgcgaccgcatcctg
atcgtcaagggcggcctgcgcgaggacgaattcaacggcggctacagcctgcgcatccgc
caatgctgggactacgagcagatctgcgccgaccacgcacagcggctgtcgctgcgtctg
gatctgcgtgaaaaacaggctttcaaacgcatcgatgccctgctggcaaagcaccgcccc
ggcaagactcccttgcgcctggacctgttgctacgcgcgcccagcggcggcgtggccggc
atgctcgatctcaacggcggccactcggtgcgcatcgaccagcacctgatggacagcctg
cgcgccgacccggcggtgcggaccctgaagatcaagtacaaccctccgtgggcgtga
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