Xanthomonas prunicola: MUG10_10225
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Entry
MUG10_10225 CDS
T08368
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xpr
Xanthomonas prunicola
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpr03032
]
MUG10_10225
03400 DNA repair and recombination proteins [BR:
xpr03400
]
MUG10_10225
Enzymes [BR:
xpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MUG10_10225
DNA replication proteins [BR:
xpr03032
]
Prokaryotic type
DNA Topoisomerases
MUG10_10225
DNA repair and recombination proteins [BR:
xpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MUG10_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
DUF2477
Motif
Other DBs
NCBI-ProteinID:
USJ02426
LinkDB
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Position
complement(2267312..2268589)
Genome browser
AA seq
425 aa
AA seq
DB search
MACAHGVVVPLTQPSLAALNNRGQPLDLCAMKAKRVLRNAAATASSVGKLAAEATGAAVA
TAAVASVAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRVGDADTLQRI
RSLAIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADWAQVRGQGKFERVIAFGTAL
PKLRRRLRRDLVLPGFPREKVLAMVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEF
LKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGQV
NDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALG
NTPSVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAATLKFLTASRSKLKAQATPAS
KRKSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgcacacggcgttgtcgttccgttgacgcagcctagtcttgccgcgctcaac
aatcgcggccagccattggacctctgcgcaatgaaagccaaacgtgttcttcgcaatgcc
gcagccactgccagcagtgtcggaaagcttgctgcggaagccaccggcgccgctgtcgcc
acggccgcggtggcgagcgtggcggcggtggcgcaggccaaggccaccgcgcgcgcggcc
gggctcacttatgtcaacgatcaacagcccggtattagccgccgcaaggccggcaagagc
ttcagctaccgcgatgccgatggacaacgcgtcggcgatgccgacaccttgcaacgcatc
cgttcgctggcgattccgccggcgtataccgaggtgtggatctgtgcaaagcccaatggg
catctgcaggccaccgggcgcgacgcacggcggcgcaagcaataccgctatcacgccgat
tgggcgcaggtgcgtggccagggcaagttcgaacgcgtgatcgccttcggtaccgcgttg
cccaaactgcggcgtcggttgcgtcgcgacctggtgctgccaggatttccgcgcgagaag
gtgttggcgatggtggtggcattgctggccgacaccttggtgcgcgtgggaaatgccgaa
tatgcgcgcagtaatcgctcgtatgggctgaccacgctacgcaaccggcacatggaattt
ctgaaaggcggccgcgcgcggctcaaattccgcggcaaaagcggccaggaccacgacatc
gaagtggacgataagcagctggtcaaactgatccggcagtgccagcaattgcccgggcaa
tccttgttccagtaccgcgacgacgatggccagttgcagccggtggattcgggccaggtc
aacgattatctgcgcgaggccatgggcgaggacttcactgccaaggatttccgcacctgg
ggcggcaccttggctgcattgcagcggctagcgcgcttgccgttacccgaacgcagcagc
gaacgcgcgctgacgcaggtgcagaacgatgtcatccgcgaagtggccgacgccttgggc
aacacgccctcggtgtgccgcaaagcctacatcgacccgtgcgtcttcgaaggctggcgt
gcgggccagctccaggcgatggccaccggtgtgcgcggcgagcgccaatgggaagccgcc
acgctgaagttcttgaccgcatcgcgtagcaagctcaaggcacaggcaacgcctgcgtcg
aagcggaagtcagcgtaa
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