Xanthomonas prunicola: MUG10_12795
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Entry
MUG10_12795 CDS
T08368
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
xpr
Xanthomonas prunicola
Pathway
xpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG10_12795 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xpr03021
]
MUG10_12795 (rho)
03019 Messenger RNA biogenesis [BR:
xpr03019
]
MUG10_12795 (rho)
Transcription machinery [BR:
xpr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MUG10_12795 (rho)
Messenger RNA biogenesis [BR:
xpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MUG10_12795 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
OB_RNB
S1CSD-TOTE-2
Fungal_virus_P2_C
Spore_III_AA
AAA_22
TFIIA
Motif
Other DBs
NCBI-ProteinID:
USI98989
LinkDB
All DBs
Position
complement(2886579..2888468)
Genome browser
AA seq
629 aa
AA seq
DB search
MSDHPSSDTGSSVDAPVEKRVRKPRVSKTAVINEDGGAQQPNLPLPASPAPEAPRAPQAP
SRTADPAPAQTSSDGAHASQAPSANHGGDTHGESREGGQSQQQRFNQAQQQQNQNQAQSQ
GQGQQQGQAQAQGQNQNAGQNQQGQGGQGQGQNQQGQNQQGNRRDRFRNRRDRGPRDRFG
NEGGGMPSSDGSNEPFIARPHPAVPEGFPVYSLSDLKRMPAQKLLDIADQLNIQEGVARA
RKQDVIFALLKVLTRHGEGVAADGVLEILPDGFGFLRAAEASYLAGPDDTYISPSQIRRF
NLRTGDHLSGRIRFPKDGERYFALSIVDTINGEPLEASKNKVLFENLTPLFPRRRFRLER
GDGSTEDITGRILDLMAPQGKGQRALIVSPPKAGKTMMMQQVATAITTNHPEVHMIVLLI
DERPEEVTEMQRTVRGEVISSTFDEPAARHVQVAEMVIERAKRLVEHKKDVVILLDSITR
LARAYNNVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSKMDE
VIYEEFKGTGNSEVHLNRRITEKRVYPAIDINRSGTRREDLLIEPELLQKIWILRKLLHP
MDEIAAMEFLLDKMKTTKSNDEFFSSMKR
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgatcatccttcctccgatactgggagcagcgttgacgctcccgtcgagaagcgc
gtgcgcaagccgcgcgtgagcaagaccgccgtcatcaatgaagacggcggcgcacagcag
cccaatctgcccttgcccgccagccccgcacccgaagcacctcgtgccccgcaggcaccg
tcgcgcactgccgatccggcaccagcgcagacgtccagcgatggcgcacacgccagtcag
gcccccagcgccaaccacggcggcgacacccacggcgagtcccgcgagggcggccagtcg
cagcagcagcgcttcaaccaggcgcagcaacagcagaaccagaatcaggcccagagccag
ggacaaggccagcagcagggtcaagcccaggcacaaggccagaaccagaacgccggccag
aatcagcaaggccagggcggtcaaggtcaggggcaaaaccagcaaggccagaaccagcag
ggcaatcgccgcgaccggttccgcaaccgccgcgaccgcggcccgcgtgaccgcttcggt
aacgaaggcggcggcatgccatcgtccgatggcagcaacgaaccgtttatcgcacgcccg
catccggccgtgccggaaggcttcccggtctactcgctgagcgatctcaagcggatgccg
gcgcagaagctgctggatatcgccgaccagctcaacatccaggaaggcgtggcgcgcgcg
cgcaagcaggacgtcatcttcgccctgctcaaggtgctcacccgtcatggcgaaggcgtt
gccgccgatggcgtgctggaaatcctgccggacggcttcggcttcctgcgtgccgcagaa
gccagctatctggccggcccggacgacacctatatctcgcccagccagatccgccgcttc
aacctgcggaccggcgatcacctgtccggccgcatccgcttcccgaaggacggcgaacgc
tatttcgcgctgtcgatcgtggacaccatcaacggcgagccgctggaagccagcaagaac
aaggtgctgttcgagaacctgaccccgctgttcccgcgtcgccggttccgtctggaacgt
ggcgatgggtccaccgaggacatcaccggccgcatcctggatctgatggcgccgcagggt
aagggtcagcgcgcactgatcgtctctccgcccaaggccggtaagacgatgatgatgcag
caggtggccacggccatcaccaccaatcatcccgaagtgcacatgatcgtgctgctgatc
gacgagcgcccggaagaggtgaccgaaatgcagcgcaccgtgcgcggcgaggtcatctcc
tccacgttcgacgagccggctgcgcgccatgtgcaggtcgccgagatggtgatcgaacgg
gccaagcgcctggtcgagcacaagaaggacgtggtgatcctgctcgactcgatcacccgc
ctggcacgtgcctacaacaacgtggtgcccagctccggcaaggtgcttaccggtggtgtg
gacgccaacgcgctgcaccgtccgaagcgcttcttcggcgcggcacgtaacgtggaggaa
ggcggctcgctgaccatcatcgccaccgcgctggtcgagaccggcagcaagatggacgag
gtgatctacgaagagttcaagggcaccggcaacagcgaagtgcatttgaaccgtcgcatc
accgaaaagcgcgtttatcctgcgatcgacatcaaccgctcgggcacgcgtcgcgaagat
ctgttgatcgagccggagctgctgcagaagatctggatcctgcgcaagctgctgcacccg
atggacgaaatcgcggcaatggaattcctgctggacaagatgaagaccaccaagtccaac
gacgagttcttcagttcgatgaagcgctga
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