Xanthomonas prunicola: MUG10_13860
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Entry
MUG10_13860 CDS
T08368
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
xpr
Xanthomonas prunicola
Pathway
xpr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUG10_13860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpr03019
]
MUG10_13860
Enzymes [BR:
xpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUG10_13860
Messenger RNA biogenesis [BR:
xpr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUG10_13860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
P-loop_SecA
HEM4
Motif
Other DBs
NCBI-ProteinID:
USI99182
LinkDB
All DBs
Position
complement(3101766..3103151)
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AA seq
461 aa
AA seq
DB search
MSFESLGLAPFLLRALAEQGYETPTAIQQQAIPLVLAGHDLLAGAQTGTGKTAAFGLPLL
QHLGTSPQPVNGPRKPRALILTPTRELATQVHDSLRGYSKYLRIPSAVIYGGVGMGNQLD
ALRRGVDLLIACPGRLIDHIERRSVDLSGIEVLILDEADRMLDMGFLPSIKRILTKLPRQ
DRQTLLFSATFEENIKQLALEFMRNPMQIQVTPSNTVAESITHRVHPVDGARKRDLLLHL
LAQDSREQTLVFARTKHGSDKLALFLEKSGIKTAAIHGNKSQGQRMRALSDFKAGRVTVL
VATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGSTGEAISLVAQDEAKLLRQ
IVRMLGRDVEIRDVPGYEPQTPIRWGNSAPGRAEQPGGDRAPRKSHARRPHGDAPRQAHA
HAGPKKPGGQRSSGPRQANAGAGAGRRDGRGGAGRPANRGA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaatccctgggcctggcgcccttcctgctgcgcgcgttggccgagcagggc
tatgaaacccccactgcgatccagcagcaggcgatcccgctggtgctggccggtcatgac
ctgctggccggcgcgcagaccggtaccggcaagaccgccgcgttcggcctgccgctgctg
cagcacctgggcaccagcccgcagccggtcaacggcccgcgcaagccgcgcgcgctgatc
ctgaccccgacccgcgagctcgccacccaggtgcacgacagcctgcgcggctacagcaag
tacctgcgcattcccagtgccgtgatctacggcggcgtcggcatgggcaaccagctcgat
gcgctgcgtcgtggcgtggacctgctgatcgcctgcccgggccggctgatcgaccatatc
gagcgtcgcagcgtggacctgtccggcatcgaagtgctgatcctggacgaagccgaccgc
atgctcgacatgggctttctgccgtcgatcaagcgcatcctgaccaagctgccgcgccag
gaccgtcagaccctgctgttctcggccaccttcgaagagaacatcaagcagctggcgctg
gaattcatgcgcaacccgatgcagatccaggtcaccccgagcaacaccgtggccgagagc
atcacccaccgtgttcacccggtcgacggcgcgcgcaagcgcgatctgctgctgcacctg
ctggcgcaggacagccgcgagcagaccctggtgttcgcgcgcaccaagcacggcagcgac
aagctggcgctgttcctggagaagtccggcatcaagaccgcggcgatccacggcaacaag
agccagggccagcgcatgcgcgcgttgagcgacttcaaggccggccgcgtgaccgtgctg
gtggccaccgatatcgccgcgcgcggcatcgacatcgaccagttgcccaaggtcatcaac
tacgacctgccgatggtggccgaggactacgtgcaccgcatcggccgcaccggccgtaac
ggttccaccggcgaggcgatctcgctggtggcgcaggacgaagccaagctgctgcgccag
atcgtgcgcatgctgggccgcgacgtggaaatccgcgacgtgccgggctacgagccgcag
accccgatccgttggggcaatagcgcaccgggccgcgccgagcagccgggtggcgatcgc
gcaccgcgcaagagccacgcccgtcgtccgcatggcgatgcaccgcgtcaggcgcatgcg
catgccggtccgaagaagccaggtggccagcgcagcagcgggccgcgtcaggccaatgcg
ggcgcgggtgcaggccggcgcgacggccgtggcggtgcaggccgtccggccaaccgcggc
gcctga
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integrated database retrieval system
