Xanthomonas rydalmerensis: QN244_00540
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Entry
QN244_00540 CDS
T10161
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QN244_00540 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xry03400
]
QN244_00540 (recD)
Enzymes [BR:
xry01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QN244_00540 (recD)
DNA repair and recombination proteins [BR:
xry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QN244_00540 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
AAA_22
NAT10_TcmA_helicase
T2SSE
UvrD_C
DEAD
AAA_16
Herpes_Helicase
nSTAND3
SLFN-g3_helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WOS53561
LinkDB
All DBs
Position
120854..122866
Genome browser
AA seq
670 aa
AA seq
DB search
MSQPNPLLAALYRHGTLRTLDHAFAHSLARLDPDTPDLVLAGAALASLAVASGHAGLDPA
RASLLLDSRDGAPPALPTADDWSRALAASRWVAQPAAEDAASADSPLVLEHGLLYLRRYR
EYERRLAQGLRRLATQPLPHSDLSALAPLFAQVFPLPPGEGARRAGEGTTTGDLQSAGDP
HPDRQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRLAQARATGLPPPRIALAAPTG
RAAERMAESLRAAVARALADGVDPALAEALPAGASTLHRLLGVIPDLPRFRHDADNPLPF
DLIVIDEASMVDLPLMCKLVEAVADGAQLILLGDADQLPSVEAGDVLAAILQAAGPGDAL
QADDARALQPLLGDSAVAHDHGGLAGHRVHLLRGYRQAQDFALAPLADAVRSGDADGTLR
LLRDGQLAGVHFHDGVDDPLAAGGDALLAHWRALGDADDPAQALRAAARLRLLTAVRAGP
QGARGLNARIEQLLAETASGARRLGAAAPWFHGRLLLITENSYRHGLFNGDVGICLRDAQ
GTLVAWFDGAGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPTRDARVLSRE
LVYTGITRARRALHIAASEAVLRAALARHAARISGLAWRLGGVELSVDPAPPPPTPPAKD
EPVPSQGSLF
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcaacccaaccctctcctcgccgccctctaccgccacggcaccctgcgcacgctg
gaccacgccttcgcgcacagcctggcccgcctcgacccggacacgcccgacctggtcctc
gccggcgccgccctggcctcgctggcagtcgccagcggccacgccggcctggacccggca
cgcgccagcctcctgctcgacagccgcgacggcgccccgcccgcactgcccaccgcggac
gactggagccgcgcgctggccgcctcgcgctgggtcgcgcaacccgccgccgaggacgcc
gctagcgccgacagcccgctggtgctggaacacggcctgctctacctgcgccgctaccgc
gagtacgagcgacgcctggcccaagggctgcgccgcttggccacgcagccgctgccacac
agcgacctgtcggccctcgcaccactgttcgcccaggtcttccctctccccccgggagag
ggtgcccgcagggcgggtgagggtacgaccacgggcgatctccaatcagcgggcgacccc
caccccgaccgccaagcccaggccgccgcgctcgcgctgcgccgcgccctgctgctggtc
accggcggccccggcaccggcaagaccaccaccatcgcccgcctgctgctgctgcgtctc
gcccaggcccgtgccaccggcctgccgccgccgcgtatcgcgctggccgcgcccaccggc
cgcgccgccgaacgcatggccgagagcctgcgcgccgcggtggcgcgcgcactcgccgac
ggcgtcgacccggccctggccgaagcactgccggccggcgccagcaccctgcatcgcctg
ctcggcgtcattcccgacctgccgcgcttccgccacgacgccgacaacccgctgccgttc
gacctgatcgtgatcgacgaagcctccatggtcgacctgccgctgatgtgcaagctggtc
gaagccgtggccgacggcgcgcaattgatcctgctcggcgatgccgaccagttgccgtcg
gtggaagccggcgacgtgctcgccgcgatcctgcaggcggccggccccggcgacgcgctg
caggccgacgacgcgcgggcgctgcagccgctgctcggcgacagcgcggtcgcgcacgac
catggcggcctggccgggcaccgggtgcacctgctgcgcggctaccgtcaggcccaggac
ttcgccctggcgccgctggccgacgcggtgcgcagcggcgatgccgacggcacgctgcgg
ctgctgcgcgacggccagctcgccggcgtgcacttccacgacggcgtcgacgacccgctc
gccgccggcggcgatgccttgcttgcgcactggcgcgcccttggcgatgccgacgatccg
gcgcaggccctgcgcgccgctgcgcgcctgcgcctgctcaccgccgtgcgcgccggcccg
cagggcgcgcgcgggctcaacgcacgtatcgagcaattgctggccgagaccgccagcggc
gcgcgccgtctcggcgccgccgcgccctggttccacggccgcctgctgctgatcaccgag
aacagctaccgccacgggctgttcaacggcgacgtcggcatctgcctgcgcgacgcgcag
ggcaccctggtcgcctggttcgacggcgccggcgacggccaggtccgcggcttccacccg
gccgcgctgcccgcgcacgagagcgccttcgccatgaccgtacacaaggcccagggcagc
gaattcgacgaagtctggctgcagctgccgacccgcgacgcccgcgtgctcagccgcgaa
ctggtctacaccggcatcacccgcgcccgccgcgcgctgcacatcgccgccagcgaagcg
gtgctgcgcgccgcgctggcgcggcatgcggcgcggatctcgggattggcgtggcggttg
ggtggggtggagttgagtgtcgatccagcaccaccaccgccaacgcctccagcgaaggat
gagccggtccccagccagggctcgttgttctga
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