Xanthomonas rydalmerensis: QN244_00745
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Entry
QN244_00745 CDS
T10161
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xry Xanthomonas rydalmerensis
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xry03032
]
QN244_00745
03400 DNA repair and recombination proteins [BR:
xry03400
]
QN244_00745
Enzymes [BR:
xry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QN244_00745
DNA replication proteins [BR:
xry03032
]
Prokaryotic type
DNA Topoisomerases
QN244_00745
DNA repair and recombination proteins [BR:
xry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QN244_00745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WOS53594
LinkDB
All DBs
Position
176215..177444
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AA seq
409 aa
AA seq
DB search
MSNASRSTAAAEAARARQSRQAASSAGLVYVSDQEPGIARRRAGKGFGYRMPDGSAVRDA
ATLQRIRQLAIPPAYTEVWICARDNGHLQATGRDARRRKQYRYHADWAQVRGDGKFERIV
AFGQALPRLRRRLRRDMALPGYPRDKVLAMVVALMAETLVRVGNAEYARSNRSYGLTTLR
NRHLAFVKGGRARLQFRGKGGQEHDIEVDDAHLVKLIRGCQQLPGQALFQYRDDDGQLQP
VDSGEVNDYLREAMGESFTAKDFRTWGGTRAALQRLAALPLPDTGGERALAQAQNAVIRE
VAEALGNTPAVCRKAYIDPCVFDGWRCGRLHGLCEGVRGERQWDLITLKYLGRARTAARK
AAKAAGRTSAKAPSLPKATRATRKGAAAIPQGGGTRAKRKTAPAARKRA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcgtcccgttccaccgccgccgccgaggcggcgcgtgcccgccagtcccgc
caggccgccagcagcgcgggcctggtctacgtcagcgatcaggagccgggcatcgcccgt
cgccgtgccggcaagggcttcggctaccgcatgcccgacggcagcgcggtgcgcgacgcg
gccaccctgcagcgcatccgccagctggcgatcccgccggcctataccgaggtgtggatt
tgcgcgcgcgacaacggtcatctgcaggccaccggccgcgacgcgcgtcggcgcaagcaa
taccgctaccacgccgactgggcgcaggtgcggggcgatggcaagttcgagcgcatcgtc
gccttcggccaggcgctgccgcggctgcgccggcgcctgcgtcgcgacatggccctgccc
ggctacccgcgcgacaaggtactggcgatggtggtggcgctgatggccgagaccctggtg
cgcgtgggcaatgccgaatacgcgcgcagcaaccgctcctatggcctgaccacattgcgc
aaccgccacctggccttcgtcaagggcggccgcgcgcggctgcagttccgcggcaagggc
ggccaggagcacgacatcgaggtcgacgacgcgcatctggtcaagctgatccgcggctgc
cagcagctgcccgggcaggcgctgttccagtaccgcgacgacgacggccagctgcagccg
gtggattcgggcgaggtcaacgactacctgcgcgaggcgatgggcgagagcttcaccgcc
aaggacttccgcacctggggcggtacccgcgccgcgctgcagcggctggcggcgttgccg
ctgcccgacacgggcggcgaacgcgcgctggcgcaggcgcagaacgcggtgatccgcgag
gtggccgaggcgctgggcaataccccggcggtgtgccgcaaggcctacatcgacccgtgc
gtgttcgacggctggcgctgcgggcgcctgcacggcctgtgcgagggcgtgcgcggtgag
cgccagtgggatctgatcacgctgaagtacctggggcgggcgcgcaccgcggcgcgcaag
gcggccaaggccgccgggcgcacctcggccaaggcgccgtcgctgcccaaggccacgcgt
gccacgcgcaagggcgcggcggcgatcccgcagggcggcggcacccgcgccaagcgcaag
accgcgcccgcggcacgcaagcgcgcctga
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