Xanthomonas rydalmerensis: QN244_03190
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Entry
QN244_03190 CDS
T10161
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xry Xanthomonas rydalmerensis
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xry03021
]
QN244_03190 (rpoH)
Transcription machinery [BR:
xry03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QN244_03190 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
KORA
HTH_11
HTH_AsnC-type
Phage_terminase
HTH_3
HTH_10
UCR_14kD
GntR
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WOS54036
LinkDB
All DBs
Position
739505..740383
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AA seq
292 aa
AA seq
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MSQTLTSNALVANNLPIPSPLGSLDAYIGAVHQIPVLTSDEEHALAVRYRDQEDLDAARE
LVHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPEMGVRLVSFAVHWIRAE
MHEYILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWMNAAEVTAVAKDLNVSEREVMEME
SRLSGRDIGFDAPSDEDDDHAPPSPAAYLMANEEDPSQAYERADSEDNQLQLLREGLAEL
DARSRDIIKRRWLDADSKITLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgagccagactcttacttccaacgcattggttgccaacaacctcccgatccccagtccg
ctcggttcgctggatgcctatatcggcgccgtgcaccagatcccggtgctgacgtccgac
gaggaacacgcactggcggtgcgctatcgcgaccaggaagacctggacgcggcccgcgaa
ctggtccattcccacctgcgcttcgtggtgcacgtggcccgcggctacaacggctacggc
ctgccgctgggcgacctgatccaggaaggcaacatcggcctgatgaaggcggtcaagcgt
ttcgacccggagatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgag
atgcacgagtacatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcaa
cgcaagctgttcttcaacctgcgcaagtccaagacccgcctgggctggatgaacgcggcc
gaggtcaccgcggtggccaaggacctcaacgtgtccgagcgcgaggtgatggagatggag
tcgcgcctgtccggtcgcgatatcggcttcgatgcgccgtccgacgaggacgacgaccac
gcgccgccgtcgccggccgcgtatctgatggccaacgaggaagatccctcgcaggcctac
gaacgcgccgacagcgaggacaaccagctgcagttgctgcgcgaaggcctggcggaactg
gatgcgcgttcgcgcgacatcatcaagcgccgctggctggatgccgacagcaagatcacc
ctgcaggagctggccgacgagtacggcgtgtcggccgagcgcatccgtcagatcgaggcg
aatgcgctgaagaagatgaaggcgctgttcgtcgcctga
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