Xanthomonas rydalmerensis: QN244_03970
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Entry
QN244_03970 CDS
T10161
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry00550
Peptidoglycan biosynthesis
xry01100
Metabolic pathways
xry01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QN244_03970 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QN244_03970 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xry01011
]
QN244_03970 (mrdA)
Enzymes [BR:
xry01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QN244_03970 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
xry01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
QN244_03970 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
WOS54176
LinkDB
All DBs
Position
934053..936113
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AA seq
686 aa
AA seq
DB search
MALHPRRAQKNPHAEAEQFRRRAALGFLGVLVALLGLGGWYFKLQVLDHDVYATRSDANR
IKPRPVVPGRGMIYDRNGRLLAENVPAFRLDVTPDKVADMDALLAELGKVIALSPEDIER
FQAARKASRSFRPITLKLRVSEEERARFAVDRWRFPGVELEPYLTRHYPYGDLFAHIIGY
VGRIDEKDLETLGEGNAALTHIGKSGLERYYEEQLRGKVGYEQVETNVQGRAIRTVGRVP
AQSGADLRLSIDADLQRAMVAAFGDYQGSAIAIDPRTGEILAMVSLPSYDPNLFVNGISH
ADFQALNSDPSRPQFNRLVLGGVAPGSTIKPFMGLAGLDSGTRRPEDKILSTGMFYLPGV
SRGWGDSHRGGHGWTDLRKSIAQSVNTYYYKLAIDMGISKVDQYMSRYGFGVPTGIDLVG
ETGGIVPSPAYKAKSRKEAWYPGDTVNIAIGQGDWKVTPLQLVRGVAGLADGQLRTPHLV
MATREAFDQPWAPVQPGTSKPISDNPSNLQAVREGMMDTMRPGGSGHAIAIGAPYEMAGK
TGTAQVVSRKGLAAVDPRSLPMHLRHRSLFEGFAPADKPTIALAIAVEGGGYGASTAAPI
ARKIFDAWLLGRLPPGVEPLDSLRGATAFGSHLYYAEDPGSRAAADAVALAAGERPVLIG
QAEVDAAAVPLQAAPPPIPDEIPDER
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccttgcacccgcgccgcgcgcagaagaacccgcacgccgaggccgagcagttccgg
cgccgcgcggcgctgggctttctcggcgtgctggtggcgttgctgggcctgggcggctgg
tacttcaagctgcaggtgctggaccacgacgtctacgccacccgctccgacgccaaccgc
atcaagccgcggccggtggtgcccgggcgcggcatgatctacgaccgcaacggccgcctg
ctggccgagaacgtgcccgcgttccggctcgacgtgaccccggacaaggtcgccgacatg
gacgccctgctggccgagctgggcaaggtcatcgcgctgtcgccggaagacatcgagcgc
ttccaggccgcacgcaaggccagccgcagcttccgcccgatcaccctgaagctgcgcgtc
agcgaagaggaacgggcacgcttcgcggtggaccgctggcgcttcccgggcgtggagctg
gaaccctacctgacccggcactacccctacggcgacctgttcgcgcacatcatcggctac
gtcggccgcatcgacgagaaggacctggagacgctgggcgagggcaatgccgcgttgacc
cacatcggcaagtccgggctggagcgctattacgaggaacagctgcgcggcaaggtcggc
tacgaacaggtcgagaccaacgtgcagggccgtgcgatccgcaccgtcggccgggtgccg
gcgcagtccggcgccgacctgcgcctgtccatcgacgccgatctgcagcgggccatggtc
gccgccttcggcgactaccagggctcggcgatcgccatcgatccgcgcaccggcgagatc
ctggcgatggtcagcctgccgtcctacgaccccaacctgttcgtcaacggcatctcccac
gccgatttccaggcgctcaacagcgacccgtcgcggccgcagttcaaccgcctggtgctg
ggcggcgtggcgcccggctccaccatcaagccgttcatgggcctggccggcctggacagc
ggcacccgccgcccggaggacaagatcctctcgaccggcatgttctacctgcccggggtc
agccgcggctggggcgactcgcaccgcggcggccacggctggaccgacctgcgcaagtcg
atcgcgcagtcggtgaacacctactactacaagctggccatcgacatgggcatctccaag
gtcgaccagtacatgagccgctacggcttcggcgtgcccaccggcatcgacctggtcggc
gagaccggcggcatcgtgccgtcgccggcatacaaggccaagagccgcaaggaagcctgg
taccccggcgacacggtcaacatcgccatcggccagggcgactggaaggtgacgccgctg
caactggtgcgcggcgtcgccggcctcgccgatgggcaactgcgcacgccgcacctggtg
atggccacgcgcgaggccttcgaccaaccgtgggcgccggtacagccgggcacgagcaag
ccgatcagcgacaaccccagcaacctgcaggcggtgcgcgaaggcatgatggacaccatg
cgtccgggcggcagcggccatgccatcgccatcggcgcgccgtacgagatggccggcaag
accggtaccgcgcaggtggtcagccgcaaggggctggcggcggtcgatccgcgcagcctg
ccgatgcacctgcgccaccgctcgctgttcgaaggcttcgcgccggccgacaagcccacc
atcgccctggcgatcgcggtggaaggcggcggctacggcgccagtaccgccgcgccgatc
gcgcgcaagatcttcgacgcctggctgctcggccggctgccgcctggcgtggagccgctg
gacagcctgcgcggcgccaccgcgttcggcagccacctgtactacgccgaggatccgggt
tcgcgcgccgcggccgatgcggtcgcgctggccgccggtgagcgcccggtgctgatcggc
caggccgaggtggacgccgcggcggtgccgctgcaggccgcgccgccgccgattcccgac
gaaattccggacgagcgatga
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