Xanthomonas rydalmerensis: QN244_06110
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Entry
QN244_06110 CDS
T10161
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry00550
Peptidoglycan biosynthesis
xry01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QN244_06110 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xry01003
]
QN244_06110 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xry01011
]
QN244_06110 (mrcB)
Enzymes [BR:
xry01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
QN244_06110 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
QN244_06110 (mrcB)
Glycosyltransferases [BR:
xry01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
QN244_06110 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xry01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
QN244_06110 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WOS54567
LinkDB
All DBs
Position
1471781..1474213
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AA seq
810 aa
AA seq
DB search
MPRRYDDHDTDDQDDALDSPAAVWRRRLLTWGLAAAALGLGFLIPYTVYLNKQVTQRFGE
LRWQIPTRVYARPLVLAPDTAMDPQTLKTELDAASYRADAGAERPGSYQQDGSRFVIASR
GYVDVDGRVAPRRIEVGLGGGRVVALRDAQTRKSLKAARLDPARIATLYGQKQEERRLVR
VDEVPELLVTGLQAVEDRDFNSHHGIDLSGMVRAAWVMVRSGGKSRQGASTLTQQLARSG
LLGIGKEQTVTRKFNEILYALIMEARYDKRTILEAYLNQVYLGQRGSQAVHGVASGAEFW
FGRELDALAPEQVALLIGLVKGPSYYDPRRYPERALDRRNFVLGKLRESELIDEPTYRKA
LAAPLGVPANPGLVAANRFPAYVDLVRRQLARDYPESALQGAGLSVLTGMSPSAQAYAEG
AVTRTITSLETNKKRPPLQAGLVLTDTHNGEVLAVVGSRDVAQPGFNRAIEAQRQVGSLL
KPFVYLLALAQPDRYSLASWVDDTPVTVQLGRGRNWSPGNSDGRSHGTVRVVDALAHSYN
QATVRIGMQVGPERVAQLVKVLAGIEAEVNPSLILGATDQSPYAMAQLYQFLASGGEIQP
LHAVRGVLDPQGKLLKRYDKTPAPAQEGDSIAANLVGMALQQVVSNGTARQLLSDGLGKL
SPAGKTGTSNDGVDSWYAGYTGDHLAVIWIGNDQNKQTGLYGATGAMRVWSGIFSRLPSA
PLQVQGKGIDWQWMDPVGYNSTDPSCPGARQFPFVVGFVPAYAACTPPQALPDEAAPAEG
ERQGGGWRSWFGLDKKKDPPADAAAPPPAH
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgctacgacgatcacgacaccgacgatcaggacgacgccctggacagcccc
gccgcagtatggcgccggcgtctgctcacctggggcctggccgccgccgcactcggcctg
ggcttcctgattccgtatacggtctatctgaacaaacaggtcacccagcgtttcggcgaa
ctgcgctggcagattcccacccgcgtgtacgcgcggccgctggtgctggcgccggacacg
gcgatggacccgcaaacgctgaagaccgaactggatgcggccagctatcgcgccgacgcc
ggcgccgagcgtcccggcagctaccagcaggacggcagccgcttcgtcatcgccagtcgc
ggctacgtcgacgtcgacggccgggtcgcgccgcgccgcatcgaggtcggcctgggcggc
ggtcgcgtggtggcgctgcgcgatgcgcagacgcgcaagtcgctcaaggccgcgcgcctg
gatccggcgcgcatcgccacgctgtacggacagaagcaggaagagcggcgcctggtgcgc
gtggacgaggtgccggaactgctggtcaccggcctgcaggcggtggaagaccgcgacttc
aactcgcaccacggcatcgacctcagcggcatggtccgcgcggcctgggtgatggtgcgt
tccggcggcaagagccggcagggcgccagcaccctgacccagcagctggcgcgcagcggc
ctactcggcatcggcaaggaacagaccgtcacccgcaagttcaacgagatcctgtacgcg
ctgatcatggaggcgcgctacgacaagcgcaccatcctggaggcgtacctcaaccaggtg
tacctgggccagcgcggcagccaggcggtgcatggcgtggcctcgggcgcggagttctgg
ttcggccgcgaactcgacgcgctggcgccggaacaggtggcgctgctgatcggcctggtc
aaggggccgtcctactacgacccgcggcgctatcccgagcgcgcgctggatcggcgcaac
ttcgtgctgggcaagctgcgcgagagcgagctgatcgacgagccgacctatcgcaaggcg
ctggccgcgccgctaggcgtgccggccaatcccggcctggtcgccgccaaccgcttcccg
gcctatgtcgacctggtgcggcgccagctggcgcgcgattacccggaaagcgcgctgcag
ggcgccggcctgagcgtgctcaccggcatgtcgccgtcggcgcaggcctatgccgagggc
gcggtgacccgcaccatcacgtcgttggaaaccaacaagaagcgcccgccgctgcaggcc
gggctggtgctcaccgacacccacaacggcgaggtgctggcggtggtcggcagccgcgat
gtggcccagcccggcttcaaccgcgcgatcgaggcgcagcgccaggtcggttcgctgctc
aagccgttcgtgtacctgctggcgctggcgcagccggaccgctattcgctggccagctgg
gtcgacgacaccccggtcaccgtgcaattgggccgcggccgcaactggagtccgggcaat
tccgatggccgcagccatggcacggtgcgcgtggtcgatgcgctggcgcactcctacaac
caggccacggtgcgcatcggcatgcaggtcgggccggagcgcgtggcgcagctggtgaag
gtgctggccggcatcgaggccgaggtcaatccctcgctgattctcggcgcgaccgaccag
agcccgtacgcgatggcgcagctgtaccagttcctggcctccggcggcgagatccagccg
ctgcatgcggtgcgcggcgtgctcgatccgcagggcaagctgctcaagcgctacgacaag
accccggcgccggcgcaggagggcgactccatcgccgccaacctggtcggcatggcgctg
cagcaggtggtcagcaacggcaccgcgcggcagttgctcagcgatggcctgggcaagctg
tcgccggccggcaagaccggcaccagtaacgacggcgtggacagctggtacgccggctac
accggcgatcacctggcggtgatctggatcggcaacgaccagaacaagcagaccggcctg
tacggcgccaccggcgcgatgcgggtgtggtcgggcatcttctcgcggctgccgagcgcg
ccgttgcaggtgcagggcaagggcatcgactggcagtggatggatccggtggggtacaac
agcaccgacccgagctgccccggcgcgcgccagttcccgttcgtggtcggtttcgtgccc
gcgtatgccgcctgcacgccgccgcaggcgctgccggacgaggccgcgcccgccgagggc
gagcgccaaggcggcggctggcgtagctggttcggcctggacaagaagaaagacccgcct
gccgacgcggccgcgccgccgccggcgcattga
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