Xanthomonas rydalmerensis: QN244_07130
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Entry
QN244_07130 CDS
T10161
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry03030
DNA replication
xry03430
Mismatch repair
xry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QN244_07130 (dnaE)
03430 Mismatch repair
QN244_07130 (dnaE)
03440 Homologous recombination
QN244_07130 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xry03032
]
QN244_07130 (dnaE)
03400 DNA repair and recombination proteins [BR:
xry03400
]
QN244_07130 (dnaE)
Enzymes [BR:
xry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QN244_07130 (dnaE)
DNA replication proteins [BR:
xry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QN244_07130 (dnaE)
DNA repair and recombination proteins [BR:
xry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QN244_07130 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WOS54753
LinkDB
All DBs
Position
complement(1728774..1732364)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFAHLHIHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVELDLPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADLLIADGTQAPWRLTVLCRNRDGYLSLSRLLTRAWLEG
HRNEGGVALRPEWLQTGSDNLFALVGRESLAGRLASEGRHDLAEQQLADWQRNFGDGLHL
ELTRTGRDGEEAFNQFALHAAGIRGLPVVASNDVRFLYASDFAAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSAEEMAALFADIPDAIDNTLALAQRCNIEMQLGTYFLPAYPVPDDET
LDSWIRSQSRDGLAARLEKNPLAPGKTRQDYVDRLEFELDTIIKMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRDRVSQIITYGTMAAKAVVRDCGRVLGFPYGLVDGVAKLIPNILGIT
LKDAMGEGKDSEMASPELIQRYQAEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPTPLS
DFCPLFAEHDVDNFGKNPVTQFDKDDVEQVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIPPVEIAAIPLDDAPTYKGIFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEAILQDTYGIMVYQEQVMQMAQIVGGYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVGEAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVLPPRINASAYMFEA
ATPDTIQYGLGAIKGVGRGACEAIVAERERGGEYASLLDFCTRVESAKLNKRTLEAMINA
GAMDGLGSNRATLMLQLPEVMKATEQMARERASGQNSLFGGADTSAPALRLDLPESKEWP
LGQLLAGERETLGFYLSGHPFDPYRDEMRELVGCDLSALEKICAQSGGGRSGGGDGEKRA
WRPEVSAILAGQVVGVRRKGDSQVFVQLEDGRGRIECSAFSDAIAEFGHLLTRDRILIVK
GGVREDEFNGGYAMRIRQCWDYEQICTHHAQRLSLRLDLRQRSAWPRIDGLLARHRPGKT
PLRLDLLLQSAQGGIAGMLDLNGSHSVRVDPQLLDALRGDPAVRAVKVKYSPPWAN
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgcccatctgcacatccacaccgagttctcgctggcggattcg
accatccgtgtgcccgagaaaccggatcaggctgacccgaagaaagccaagcaggccaac
ctgctcagccgcgcggtggagctggacctgcccgcgctggcggtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgagggcgtgggcatcaagccgatcgcc
ggcgccgacctgctgatcgccgacggcacccaggcgccgtggcggctgaccgtgctgtgc
cgcaaccgcgacggctacctcagcctgtcgcggctgctgacccgcgcctggctggaaggc
caccgcaacgaaggcggcgtggcgctgcgcccggaatggctgcagaccggcagcgacaac
ctgttcgccctggtcggccgcgagagcctggctgggcgcctggccagcgaaggccgccac
gacctggccgagcagcaactggccgactggcagcgcaacttcggcgacggcctgcacctg
gaactgacccgcaccggccgcgacggcgaggaggcgttcaaccagttcgccctgcacgcg
gccggcatccgcggcctgccggtggtcgccagcaacgacgtgcgcttcctgtacgccagc
gacttcgccgcgcacgaggcgcgcgtgtgcatctcctccggccgcgtgctcgacgatccc
aagcgcccgcgcgactacagcgatcagcagtacctgaaatcggccgaggagatggccgcg
ctgttcgccgatatccccgacgcgatcgacaacacgctggcgctggcgcaacgctgcaac
atcgagatgcagctgggcacctacttcctgcccgcctacccggtgcccgacgacgagacg
ctggacagctggatccgcagccagtcgcgcgacggcctggccgcgcgcctggaaaagaat
ccgctggcgcccggcaagacccgccaggactacgtggaccggctcgagttcgagctggac
accatcatcaagatgggcttccccggctacttcctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggcccgggccgcggttccggtgccggctcgctggtg
gcgtgggcgctgcagatcaccgacctggacccgctgccgtacaacctgctgttcgagcgc
ttcctcaacccggaacgcgtgtcgatgcccgacttcgacatcgacttctgcatggatcgc
cgcgacgaggtgatcgactacgtggcgcgcaagtacggccgcgaccgggtcagccagatc
atcacctacggcaccatggcggccaaggcggtggtgcgcgactgcggccgcgtgctcggc
ttcccgtacggcctggtcgacggcgtcgccaagctgatccccaacatcctcggcatcacg
ctgaaggatgcgatgggcgaaggcaaggacagcgagatggcctcgccggagctgatccag
cgctaccaggccgaggacgacgtccgcgacctgatggacctggcgcggcagctcgaggac
ctgacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgccgacgccgctgtcg
gacttctgcccgctgttcgccgaacacgacgtcgacaacttcggcaagaacccggtcacc
cagttcgacaaggacgacgtcgaacaggtcggcctggtcaagttcgacttcctcggcctg
cgcaccctgaccatcatcgattgggcggtgaaggcgatcaacgtgcgccacgcgcgcgcc
ggcatcccgccggtggagatcgctgcgatcccgctcgacgatgcgcccacctacaagggc
atcttcgcctcgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgccgg
ctgctgaaggacgcccgccccgaccgcttcgaggacctgatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgatccccgacttcaacgcgcgcaagcacgggcagcaggag
atcgtctatcccgatccgcgcaccgaagcgatcctgcaggacacctacggcatcatggtg
taccaggagcaggtgatgcagatggcgcagatcgtcggcggctactcgctgggcggcgcc
gacctgctgcgccgcgcgatgggcaagaaggtgccggcggaaatggccaagcaccgcgag
atcttccgcgagggcgcggccaagggcggcgtcggcgaggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcg
ctggtcagctaccagaccgcgtggctgaaacgccattacccggccgagttcatggcggcc
acgctgtcctcggacatggacaacaccgacaaggtggtcggcttcctcgacgaggtgcgc
aacctcggcctgaccgtgctgccgccgcgcatcaacgcctcggcctacatgttcgaggcg
gccaccccggacaccatccagtacggcctgggcgcgatcaagggcgtgggtcgtggcgcc
tgcgaggcgatcgtggccgagcgcgagcgcggcggcgaatacgcctcgctgctggatttc
tgcacccgcgtcgaatcggccaagctcaacaagcgcacgctggaagcgatgatcaacgcc
ggcgcgatggacgggctgggcagcaaccgcgccacgctgatgctgcagttgccggaggtg
atgaaggccaccgagcagatggcgcgcgagcgtgcctccgggcagaactcgctgttcggc
ggtgccgacaccagcgccccggcgctgcgcctggacctgccggagagcaaggaatggccg
ctgggccagttgctggccggcgagcgcgagacgttgggcttctacctcagcggccatccg
ttcgacccgtaccgcgacgaaatgcgcgaactggtcggctgcgacctgagcgcgctggag
aagatctgcgcacagtccggcggcggccgcagtggcggcggcgatggcgagaagcgcgcg
tggcgcccggaggtcagcgcgatcctcgccggccaggtggtcggcgtgcgccgcaagggc
gacagccaggtgttcgtgcaactggaagacggccgcggccgcatcgaatgcagcgcgttc
tccgacgccatcgccgagttcggccacctgctgacccgcgaccgcatcctcatcgtcaag
ggcggcgtgcgcgaggacgaattcaacggcggctacgcgatgcgcatccgccagtgctgg
gactacgaacagatctgcacgcaccacgcgcagcgcctgtcgctgcgcctggacctgcgc
cagcgcagcgcctggccgcgcatcgacggcctgctcgcccgccaccgcccgggcaagacc
ccgctgcgcctggacctgctgctgcagtcggcgcagggcggcatcgccggcatgctcgac
ctcaacggcagccattcggtgcgcgtggatccgcagctgctggacgccttgcgcggcgac
ccggcggtgcgcgcggtaaaggtcaaatacagcccgccgtgggcgaactga
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