Xanthomonas rydalmerensis: QN244_07275
Help
Entry
QN244_07275 CDS
T10161
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry00300
Lysine biosynthesis
xry01100
Metabolic pathways
xry01120
Microbial metabolism in diverse environments
xry01230
Biosynthesis of amino acids
Module
xry_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QN244_07275 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xry01002
]
QN244_07275 (dapE)
Enzymes [BR:
xry01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
QN244_07275 (dapE)
Peptidases and inhibitors [BR:
xry01002
]
Metallo peptidases
Family M20
QN244_07275 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
WOS54781
LinkDB
All DBs
Position
1762294..1763424
Genome browser
AA seq
376 aa
AA seq
DB search
MSDVLELARDLIARPSVTPDDAGCQALIAQRLERAGFAIEQLRCGQVDNLWATHRGGDGP
VLALLGHTDVVPSGPREAWASDPFAPQIRDGVLYGRGAADMKGSVAAFVVAAERFVAAQP
QHPGTLAVLLTSDEEGDAIDGVRHVARLFAERGERIDWCVTGEPSSTERLGDLLRVGRRG
SLSGALRVRGVQGHVAYPHKARNPIHLAAPALAELVARHWDDGYESFPPTSLQISNVHAG
TGANNVIPGELQVAFNLRYTPHWDAPRLEAEIAALFDRRGLDYDLRWHRSGEPFYTPEGT
LRRVAREVLGEVAGAPPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVRVADL
EALPDLYLRLIERLLR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgtccttgaactcgcccgcgacctgatcgcccgcccgtcggtcactcccgac
gatgccgggtgccaggcactgatcgcgcagcggctggaacgcgccggtttcgccatcgag
cagttgcgctgcggccaggtcgacaacctgtgggcgacccatcgcggtggcgatggcccg
gtgctggcgctgctcggccataccgacgtggtgccgtcggggccgcgcgaggcctgggcc
agcgatccgttcgcgccgcagatccgcgacggcgtgctgtacgggcgcggtgccgcggac
atgaaaggcagcgtggccgctttcgtggtcgccgccgaacggttcgtggccgcgcagccg
cagcacccgggcacgctggcggtgctgctgaccagcgacgaggaaggcgatgcgatcgac
ggcgtgcgccacgtggcgcgattgttcgccgagcgcggcgaacgcatcgactggtgcgtc
accggcgaaccctcgtccaccgaacgtctcggcgacctgctgcgggtcggccgccgcggc
agcctctccggcgcgctgcgcgtgcgcggcgtgcaggggcatgtggcctatccgcacaag
gcgcgcaacccgatccacctggccgcgccggcgctggccgaactggtcgcgcggcactgg
gacgacggctacgaaagcttcccgccgaccagcctgcagatctccaacgtgcatgccggc
accggcgccaacaacgtgatccccggcgaactgcaggtcgccttcaacctgcgctacacc
ccgcactgggatgcgccgcggctggaagcggagatcgccgcgctgttcgatcgccgcggc
ctggattacgacctgcgctggcaccgcagcggcgagccgttctacaccccggaaggcacg
ctgcgccgggtagcgcgcgaggtgctgggcgaggtcgccggcgcgccgccggaggagagc
accggcggcggcacctccgatgcgcgcttcatcgcgccactgggcgcgcagtgcatcgaa
gtcggcccggtcaacgccagcatccaccaggtcgacgagcacgtgcgcgtggccgacctg
gaggcgctgccggatctgtacctgcgcctgatcgaacggttgctgcggtaa
DBGET
integrated database retrieval system
