Xanthomonas rydalmerensis: QN244_07625
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Entry
QN244_07625 CDS
T10161
Name
(GenBank) CHASE domain-containing protein
Organism
xry Xanthomonas rydalmerensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE
Response_reg
HATPase_c
PAS_9
PAS
PAS_4
HisKA
PAS_8
Hpt
PAS_3
Diguanyl_cycl_sensor
mTOR_dom
Motif
Other DBs
NCBI-ProteinID:
WOS54845
LinkDB
All DBs
Position
complement(1840342..1844418)
Genome browser
AA seq
1358 aa
AA seq
DB search
MSKKRWTPVAGPARPARLAALAVLAIGLLAALLIAHGVQQRNRAQAQARFQQLVTHVTSD
LRQRLDVYEHGLRGARGAVIAAGGERISRDRFARYSASRDYLREFPGVRGFGYVQRVARA
DEAAFLQQVHADGAPSLRIGELAPHTGDRFVIVYIQPTRSNNAAEGFDIASEPRRRAAAI
AAARSGVPTITAPVQLVQTPGKGKGGFLLLLPLYREGLPLQTPEQRWQATTGWAYAPLSI
AEVLASSDDHSNAVRLSLADSQTPTQPFYRDAAPAPAADAPAAERSVQVYGRQWRLGAQA
TPGFVRSLDQPSPLLAGVLTAGIALLLASLLYVFLTSRRRRDLILSEQSQLAALVAGTSE
AIVAEDLQGQITHWNPAATRIFGYTPEQAIGQPLQQLLGARIRDPADSGDGVRELRHRDG
HTVSVLASVSPIVGTGGDIIGHSHLLHDVTEQVRAQARVLELNATLEQQVAERTTELVTY
SALQRAILTNAGYAIVATDPDGVITLFNPAAETLLGYAAHEMIGRKATGLFLDAEQLSAR
AERMAAQSGMPVQPSFESVAALSTLGRSDTREWTYLSKDGHAFPVLLTLSTLRDDDDRVI
GYLGIAVDLTEQKRRERELRLAIDAAESANQSKSDFLANMSHEIRTPMNAILGMLYLLRH
SALSQAAQDMIQKIELSARNLLEIINDILDFSKIESGRIDLESAPFDLNELLENIAALMT
SATSAKPVEMIVEPLPPGCRWLRGDALRLNQVLINLVGNAIKFTEQGEVALSVRAFPGAE
PGKLKLLFSVRDTGIGIPREKQSLIFSPFLQADTSTSRRYGGSGLGLTISRRLVELMGGQ
LEVQSAPGQGSDFYFVIPFAVTPAPAADAEPAQARRVLIADDHDLVRRSLTDIANGFGWQ
VEAVSSGTAALAAAAPERAEFDVILLDWRMPDLDGLSVAQRIRAQSAPDRQPIIVMVTAY
ERRMIQEQQPGVADVDAVMTKPVTASALQRTIAMLLARRNGEMPAPQTGDGIVRLAGARL
LVVDDSDINREVAQRILEGEGALVDLAQDGAQALQRLRRDPGRFHVVLMDVQMPTMDGYE
ATRQLRADPALAAVPVIALTAGAYRQQQEMALSSGMNGFIAKPFQVDELIAIIRRFLPPN
LTPLPLLPLAPPPSALPADEWPASEPALLDTVQAQRLWGERDPYRRYLLKLLQEYPDPAA
SVRTLLEAQRPADALSLVHKLRGSAGSLALPALSVASAALEERLGTAPTQAEAEIAALAA
AMADTAAEVLRFADTIPVATAPAPASDAKVDPATLQASWYQVLQALDSDDPDRIDHTLRQ
LAPVLPAAQAAELQQLLENFSFREAEARIRRWLANAHD
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaaacgctggacacccgtcgccggtcctgcgcgaccggcgcggctcgccgcc
ctggccgtgctggccatcgggttgcttgccgcgctgctgatcgcgcacggcgtgcaacaa
cgcaaccgcgcccaggcgcaggcgcggttccagcaactggtcacgcatgtgaccagcgat
ctgcggcaacgcctggacgtgtacgagcatggcctgcgcggcgcgcgcggcgcggtgatc
gcggccggcggcgagcgcatctcgcgcgatcgcttcgcccgctacagcgcttcgcgcgac
tacctgcgggagtttcccggcgtgcgcggtttcggctacgtgcaacgggtggcgcgtgcc
gacgaggccgcattcctgcagcaggtgcatgccgacggcgcgccgtcgctgcggatcggc
gaactggctccgcacaccggcgaccgcttcgtcatcgtctacatccagccgacgcggtcc
aacaacgccgcggagggcttcgacatcgcgtcggagccgaggcggcgcgcggcagcgatc
gccgccgcgcgctcgggcgttcccacgatcaccgcgccggtgcaactggtgcagacgccg
ggcaagggcaagggcggcttcctgctgctgttgccgctgtaccgcgaaggcctgccgctg
cagaccccggaacaacgctggcaggccaccaccggctgggcctacgcgccattgagcatc
gccgaggtgctggcctcctccgacgatcacagcaacgccgtgcgcctgagcctggccgac
agccagacgccgacacagccgttctatcgtgatgccgcccctgcgcccgcggccgacgcc
cccgccgccgagcgcagcgtgcaggtctatgggcggcagtggcgactcggcgcacaggcc
acgcccggcttcgtgcgctcgctcgaccagccctcgccgctgctggcaggcgtgctgacc
gcgggcatcgcgctcctgctcgcctccctgctctatgtcttcttgaccagccggcgccgc
cgcgacctgatcttgagcgagcagagccaactggcagccctggtcgccggcaccagcgag
gcgatcgttgccgaagacctgcagggccagataacccactggaaccctgcggcgacgcgc
atcttcggctacaccccggagcaggccatcggccagccgctgcagcagttgctcggcgcg
cggatccgcgatccggccgacagcggggacggagtgcgcgaactgcgtcatcgcgacggt
cacacggtcagcgtgctggccagcgtttcgccgatcgtcgggaccggtggcgacatcatc
gggcattcgcacctgctgcacgacgtcaccgagcaagtgcgcgcgcaggcaagggtgctg
gagctgaacgccacgctggagcaacaggtggccgaacgcaccaccgaactggtcacctat
tcggcgctgcagcgcgcgatcctgaccaacgccggctacgcgatcgtcgccaccgacccg
gacggcgtcatcaccttgttcaaccctgccgccgaaaccctgctcggctacgccgcgcac
gaaatgatcgggcgcaaggccaccggcctgttcctggacgcggaacaactgagcgcgcgc
gccgagcgcatggcggcgcaatcgggcatgccggtgcagccctcgttcgaatcggtggcg
gcgctgtccacgctgggacgcagcgatacccgcgagtggacttacctgagcaaggacggc
catgccttcccggtgctgctcaccctgagcacgctgcgcgacgacgacgaccgggtgatc
ggctacctcggcatcgcggtcgatctcaccgagcagaaacgccgcgagcgcgagttgcgg
ctggccatcgacgcggccgagagcgccaaccagtccaagagcgacttcctggccaacatg
agccacgaaatccgcacgccgatgaacgcgatcctgggcatgctgtacctattgcggcac
agcgccctgtcgcaggcggcgcaggacatgatccagaagatcgagctgtccgcgcgcaac
ctgctggagatcatcaacgacatcctcgacttctccaagatcgagtccgggcgcatcgac
ctggaatcggcgccgttcgatctcaacgagttgctggagaacatcgccgcactgatgacc
tcggcgaccagcgccaagccggtggagatgatcgtcgagccactgccgccgggctgccgc
tggctgcgcggcgatgcgctgcgcctgaaccaggtgctgatcaacctggtgggcaacgcc
atcaagttcaccgaacagggcgaggtggcgttgtcggtccgcgccttccccggtgccgaa
cccggcaagctcaagctactgttctcggtgcgcgacaccggtatcggcatcccgcgcgag
aagcagagcctgatcttctcgccgttcctgcaggccgatacctccaccagccgccgctac
ggcggcagcggcctgggcctgaccatcagccggcgcctggtggagctgatgggcgggcaa
ctggaagtccagagcgcacccggccagggcagcgatttctacttcgtcattccgttcgcg
gtgacgccggcgccggccgccgatgccgaaccggcgcaggcgcggcgggtgctgatcgcc
gacgaccacgacctggtacgacgcagcctgaccgacatcgccaacggcttcggctggcag
gtggaagcggtgtccagcggcaccgccgcactggccgccgccgcgccggaacgcgccgag
ttcgacgtgatcctgctggactggcgcatgccggacctggacgggctgagcgtggcccag
cgcatccgcgcgcaatcggcgccggaccggcagccgatcatcgtcatggtcaccgcctac
gagcggcgcatgatccaggagcagcagcctggcgtcgccgacgtggatgcggtgatgacc
aagccggtcaccgcctcggccctgcagcgcaccatcgccatgctgctggcgcgccgcaac
ggcgagatgcccgcgccgcagaccggcgacggcatcgtgcgcctggccggggcgcgcttg
ctggtggtcgacgacagcgacatcaaccgcgaggtcgcgcagcgcatcctcgaaggcgaa
ggcgcactggtcgatctggcgcaggacggcgcacaggcgttgcagcggctacgccgcgat
cccggccgcttccacgtggtgctgatggacgtgcagatgccgaccatggacggctacgaa
gccacccggcaactgcgcgccgatccggccctggccgccgtgccggtgatcgccctcacc
gccggcgcctaccgccagcaacaagagatggcgctgtccagcggcatgaacggcttcatc
gccaaaccgttccaggtcgacgaactgatcgcgatcatccgccggttcctgccgccgaac
ctgaccccgctgccgctactgccgcttgcgccgccaccgtccgcgctgccggcggacgaa
tggccggccagcgagccggcattgctcgataccgtccaggcgcagcggctgtggggcgag
cgcgatccgtatcggcgctatctgctgaagctgttgcaggagtatcccgatccggcggcg
agcgtgcgcaccctgctggaggcgcagcggccggccgacgccctctcgctggtacacaag
ttgcgcggttcggccggatcgctggcgttgcctgcgttgagcgtcgccagcgccgcactc
gaagagcggttgggcacggcgccgacgcaggccgaggcggagatcgccgcgttggccgca
gcgatggccgacaccgctgcagaagtgctgcgcttcgccgataccatcccggtcgcgacg
gcacctgcgccagcatccgacgcaaaggtggacccggcgacgctgcaggcgtcctggtac
caggtgttgcaggcgctggacagcgacgatccggaccgcatcgaccacacgctgcggcaa
ctggcgcccgtcctgccggcggcgcaggccgccgagctgcagcagttgctggagaatttt
tccttccgcgaggccgaggccagaatcaggcgatggctggccaatgcacacgactga
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