Xanthomonas rydalmerensis: QN244_12495
Help
Entry
QN244_12495 CDS
T10161
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry00541
Biosynthesis of various nucleotide sugars
xry01100
Metabolic pathways
xry01250
Biosynthesis of nucleotide sugars
Module
xry_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QN244_12495 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xry01005
]
QN244_12495 (kdsB)
Enzymes [BR:
xry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
QN244_12495 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xry01005
]
Lipid A
QN244_12495 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
WOS51797
LinkDB
All DBs
Position
complement(2983044..2983823)
Genome browser
AA seq
259 aa
AA seq
DB search
MSAAAPPFVVAIPARYAASRLPGKPLRALGGEPLIRHVARRALAAGATQVWVAADDARIA
AAVADLDGVHVANTSADHASGTDRLAECADIAGWDDATLVVNLQGDEPFAPVAGIVAVAR
TLADSGAEMATLGTPVDAAEHLFDPNVVKLVRSATGDALYFSRAPIPWHRDAFAASQAQL
PLPGPWLRHIGIYAYRAGFLRRFAAMPPGTLERIESLEQLRVLEAGFRIAVALSPAPFPP
GVDTPEDLARAEAYLQGQA
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgcgccgccgttcgtcgtcgccattccggcccgctatgccgcatcgcgg
ctgccgggcaagcccttgcgcgcgctcggcggcgagccgttgatccgccacgtggcgcgg
cgtgcgctcgccgccggtgccacgcaggtgtgggtggccgccgacgatgcgcgcatcgcc
gccgcggtggccgacctggacggcgtgcacgtggcgaatacgtcggccgaccacgcctcc
ggcaccgaccgcctggccgagtgcgccgacatcgccggctgggacgatgcgactttggtg
gtcaacctgcagggcgacgaaccgttcgcgccggtcgccggcatcgtcgcggtggcccgg
accctggccgacagcggcgccgagatggcaacgctgggcacgccggtggacgcggccgag
cacctgttcgatcccaacgtggtcaagctggtgcgcagcgcgactggcgatgcgctgtac
ttcagccgcgcgccgatcccgtggcaccgcgacgcctttgccgcctcgcaggcgcagttg
ccgctgcccggcccgtggctgcggcatatcggcatctacgcctatcgcgccggcttcctg
cgccggttcgcggcgatgccgccgggcacgctggagcggatcgagtcgctggagcaactg
cgggtgctggaagccggcttccgcatcgcggtggcgctgtcgccggcaccattcccgccc
ggtgtggacacgcccgaggacctggcgcgcgccgaggcctacctgcaggggcaggcatga
DBGET
integrated database retrieval system
