Xanthomonas rydalmerensis: QN244_13950
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Entry
QN244_13950 CDS
T10161
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xry Xanthomonas rydalmerensis
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xry03016
]
QN244_13950 (truB)
Enzymes [BR:
xry01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QN244_13950 (truB)
Transfer RNA biogenesis [BR:
xry03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QN244_13950 (truB)
Prokaryotic type
QN244_13950 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WOS52070
LinkDB
All DBs
Position
complement(3336669..3337595)
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AA seq
308 aa
AA seq
DB search
MPVFGPRLPRIVFRRLDGIVLLDKPIGMSSNAALQAARRLFRAEKGGHTGSLDPLATGLL
PLCFGEATKLAGLLLGSAKAYEAEVVLGVTTDSDDAEGTVLRTRPVPPLDAAALEAALAP
LRGRIRQRAPIYSALKQGGEPLYVKARRGEAIEAPEREVEVHAIDVLAHAGDRLRLHVAC
GSGTYIRSLARDLGEALGCGAHIAALRRLWVEPFRNPQMVTLEHLQQLAAQDPAALEALV
LPLAAGLADFPPVRLEPAAAQRFRMGQRLRDPAWAPGLAAVFDAEGVPLGLGQVDASGLL
APQRMFNP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttcggtccgcgtctgccccgtatcgtcttccgtcgcctcgatggcatcgtg
ctgctcgacaagccgatcggcatgagttccaacgcggcgctgcaggcggcgcggcggctg
ttccgtgccgagaagggcggccacaccggcagcctggacccgctcgccaccgggctgctg
ccgctgtgcttcggcgaggcgaccaagctggccgggctgctgctcggctcggccaaggcc
tacgaagcggaggtcgtgctcggcgtcaccaccgacagcgacgatgccgagggtacggtg
ctgcggacccggccggtgccgccgctggacgcggccgccctggaggcggcgctggcaccg
ctgcgcgggcgcatccgccagcgcgcgccgatctattccgcgctcaagcagggcggcgag
ccgctgtacgtcaaggcgcgccgcggcgaggcgatcgaggcgccggagcgcgaggtcgag
gtgcatgcgatcgacgtactcgcccacgccggcgatcgtctgcgcctgcacgtggcctgc
gggtccggcacctacatccgcagtctggcccgcgacctgggcgaggcgctgggctgcggc
gcgcacatcgccgcgctgcggcggctgtgggtggagccgttccgcaacccgcagatggtc
accctggagcacctgcagcagttggccgcgcaggatccggcggcactggaggcgctggtg
ctgccgctggccgccggcctggccgatttcccgccggtgcgcctggagcctgctgcggcg
cagcgtttccgcatgggccagcggctgcgcgatccggcctgggcgcccggcctggccgcg
gtgttcgacgccgagggcgtcccgctgggcctgggccaggtcgatgcgagcgggctgttg
gcgccgcagcgcatgttcaatccgtga
DBGET
integrated database retrieval system
