Xanthomonas rydalmerensis: QN244_18185
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Entry
QN244_18185 CDS
T10161
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry00521
Streptomycin biosynthesis
xry00523
Polyketide sugar unit biosynthesis
xry00541
Biosynthesis of various nucleotide sugars
xry01100
Metabolic pathways
xry01110
Biosynthesis of secondary metabolites
xry01250
Biosynthesis of nucleotide sugars
Module
xry_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QN244_18185 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QN244_18185 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QN244_18185 (rfbC)
Enzymes [BR:
xry01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QN244_18185 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
WOS52840
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Position
complement(4292440..4292997)
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AA seq
185 aa
AA seq
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MKVIETNLPGCVVIEPAVFGDARGYFFETWNAERFGEHGLPTKFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRHGSPHFGRWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGVDWPISEPVLSGKDAVAPFLADIPVERL
PVYQP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtgattgaaaccaatctgcccggctgcgtggtgatcgagccggcggtgttcggc
gatgcgcgtggctatttcttcgagacctggaacgccgagcgtttcggcgagcacggactg
cccaccaagttcgtgcagagcaacgtctccacctcggccaagggcgtgctgcgcggcctg
cattaccagtggccgcggccacagggcaagctggtcagcgtcctcgagggcgaggtgtac
gacgtcgccgtcgacatacgtcatggctcgccccacttcggccgctgggccgcggtggtg
ctgagcgcggagaacaagaagcagttctggattccggaaggcttcgcgcacggatttgcc
gtgctgtcggagcgtgcggtgttcagctatctgtgtaccgacgtgtacgtcaaggaagcc
gacgctggcgtgcgctgggacgatgccgcgatcggcgtcgactggccgatctccgagccg
gtgctgtcgggcaaggacgctgtcgcgccgttcctggccgatatcccggtcgagcgcctg
ccggtctaccagccatga
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