KEGG   Xanthomonas rydalmerensis: QN244_18595
Entry
QN244_18595       CDS       T10161                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xry  Xanthomonas rydalmerensis
Pathway
xry00010  Glycolysis / Gluconeogenesis
xry00020  Citrate cycle (TCA cycle)
xry00260  Glycine, serine and threonine metabolism
xry00280  Valine, leucine and isoleucine degradation
xry00310  Lysine degradation
xry00380  Tryptophan metabolism
xry00620  Pyruvate metabolism
xry00630  Glyoxylate and dicarboxylate metabolism
xry00640  Propanoate metabolism
xry00670  One carbon pool by folate
xry00785  Lipoic acid metabolism
xry01100  Metabolic pathways
xry01110  Biosynthesis of secondary metabolites
xry01120  Microbial metabolism in diverse environments
xry01200  Carbon metabolism
xry01210  2-Oxocarboxylic acid metabolism
xry01240  Biosynthesis of cofactors
Module
xry_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xry_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xry_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
xry_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xry_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xry00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    QN244_18595 (lpdA)
   00020 Citrate cycle (TCA cycle)
    QN244_18595 (lpdA)
   00620 Pyruvate metabolism
    QN244_18595 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    QN244_18595 (lpdA)
   00640 Propanoate metabolism
    QN244_18595 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    QN244_18595 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    QN244_18595 (lpdA)
   00310 Lysine degradation
    QN244_18595 (lpdA)
   00380 Tryptophan metabolism
    QN244_18595 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    QN244_18595 (lpdA)
   00670 One carbon pool by folate
    QN244_18595 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xry04147]
    QN244_18595 (lpdA)
Enzymes [BR:xry01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     QN244_18595 (lpdA)
Exosome [BR:xry04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   QN244_18595 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored GIDA HI0933_like DAO NAD_binding_8 Thi4 FAD_binding_2 AlaDh_PNT_C 3HCDH_N DUF478 2-Hacid_dh_C MCRA Amino_oxidase GCV_H FAD_binding_3
Other DBs
NCBI-ProteinID: WOS52916
LinkDB
Position
complement(4383587..4385383)
AA seq 598 aa
MAVIEVKVPDIGDYSDVPVIEVLVAVGDTVKKDQGLVTLESDKATLEVPSAAAGVIKELK
VKLGDTLSEGAVIALLETADGAAAAPAAAPAEVPASKPPVAPSHRAPAEPPAPKPALASG
KPADIECKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCIPSKALLHAA
AVIDEVAHAGDFGVDFGKPKITLDKLREYKEKVVGKLTGGLASMAKQRKVRTVTGVASFV
SPNELEIVGADGKTQLLRFEHCIVAAGSQAVKLPNFPWDDKRVMDSTDALELQDIPKTLL
VVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGVEVHLKTKA
AEVKADKKGITVSFEAATAGETPALAATTYDRVLVAVGRAPNGKKIGADKAGINVTERGF
IPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIPSVAYTN
PEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEETHRVIGGAIV
GVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMSAEVYDGTITDLYIPKKK
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggcggtcattgaggtcaaggtcccggatatcggcgactacagcgacgttccggtcatc
gaggtgctggtcgccgtcggcgacacggtgaagaaggaccagggcctggtgacgctggag
tcggacaaggccacgctggaagtgccgtccgcggccgccggcgtgatcaaggagctgaag
gtcaagcttggcgacaccctgtccgagggcgcggtgatcgcgctgctggagaccgcggac
ggcgccgcggccgcgcccgccgcggccccggccgaggtgccggccagcaagccgccggtg
gcgccgtcgcaccgcgcgccggccgagccgccggcgcccaagccggcgctggccagcggc
aagcccgccgacatcgaatgcaagatggtggtgctcggcgccggccctggcggctacacc
gccgcgttccgcgctgccgacctgggcctggacacggtgctgatcgagcgctacgccagc
ctcggcggcgtctgcctcaacgtcggctgcattccctccaaggcgctgctgcatgcggcc
gccgtgatcgacgaggtcgcccacgccggcgacttcggcgtggacttcggcaagccgaag
atcaccctggacaagctgcgcgagtacaaggagaaggtggtcggcaagctcaccggcggc
ctggccagcatggccaagcagcgcaaggtgcgcaccgtcaccggcgtggcgtcgttcgtg
tcgccgaacgagttggagatcgtcggtgccgacggcaagacccagttgctgcgcttcgag
cactgcatcgtcgccgccggctcgcaggcggtgaagctgccgaatttcccgtgggacgac
aagcgggtgatggactccaccgacgcgctggaactgcaggacatccccaagaccctgctg
gtggtcggtggcggcatcatcggcctggaaatggccaccgtgtacagcgcgctgggcagc
aaggtcaccgtcgtcgagttcatggaccagttgatgccgggcgccgacaaggacctggtc
aagccgctggccgaccggctgaagaagcagggcgtggaggtccatctcaagaccaaggca
gccgaggtcaaggccgataagaagggcatcaccgtgtccttcgaagccgctaccgcgggc
gaaacgccggcgctggccgccaccacctacgaccgcgtactggtcgcggtgggtcgcgcg
cccaacggcaagaagatcggcgccgacaaggccggcatcaatgtcaccgagcgcggcttc
attccggtcgaccggcagatgcgcaccaacgtgccgcacatcttcgccatcggcgacatc
gtcggtaacccgatgctggcgcacaaggccacccacgagggcaagctggccgcggaagtg
gccgccggcgagaagaaggagtgggtggcgcgggtgattccgtcggtggcctacaccaac
ccggaaatcgcctgggtcggcgtcaccgagaccgaggccaaggccaaggggttgaaggtc
ggcgtggccaagttcccgtgggcggccagcggccgcgccatcggcatcggccgtaccgag
ggcttcaccaagctgatcttcgacgaggagacgcaccgggtcatcggcggcgccatcgtc
ggcgtgcacgccggcgacctgctggccgagatcggcctggcgatcgagatgggcgcggag
gccgaggacatcggccacaccatccacgcgcatccgaccctgagcgagtcggtcggcatg
agcgccgaggtctacgacggcaccatcaccgatctgtacatcccgaagaagaagtga

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