Xanthomonas rydalmerensis: QN244_20800
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Entry
QN244_20800 CDS
T10161
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry03030
DNA replication
xry03410
Base excision repair
xry03420
Nucleotide excision repair
xry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QN244_20800 (polA)
03410 Base excision repair
QN244_20800 (polA)
03420 Nucleotide excision repair
QN244_20800 (polA)
03440 Homologous recombination
QN244_20800 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xry03032
]
QN244_20800 (polA)
03400 DNA repair and recombination proteins [BR:
xry03400
]
QN244_20800 (polA)
Enzymes [BR:
xry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QN244_20800 (polA)
DNA replication proteins [BR:
xry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QN244_20800 (polA)
DNA repair and recombination proteins [BR:
xry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QN244_20800 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QN244_20800 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WOS53337
LinkDB
All DBs
Position
complement(4861349..4864120)
Genome browser
AA seq
923 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDNLYPLYKANRPPMPDELRAQVEPMCQIVHALGITILRQDGVEADDVIGTLALQGA
GDGLDVTISTGDKDFAQLVRPGVQLVNTMSGSRMDSDAAVMEKFGVWPHQIVDLLALMGD
AIDNVPGVEKCGPKTAAKWLAEYGSLDGVIAHADSIKGKIGENLRAALERLPLNRELVTI
KTDVALAGGPRTLGLREQEPEQLRGLYQRYGFTQALRDLDGGVAAPEAASEATPSLRGTA
AGYARAAAPAADTALDPALAAKGDYTAVTTPEQFEELLVRLRAADGFAFDTETDALDAMR
ANLVGLSFATEPGRADYLPLGHDYPGAPVQLDRALALALLKPLLEDPAKAKVGQHGKYDL
HVLRRHGVEVRGYADDTMLESFVLNSTASRHDMDSLARRYLGYDTVKYEDVAGKGAKQIA
FSQVAIDDATRYAAEDADITLRLHRTLSAQLDAEPALAQVYRDIEMPLVPVLARVEANGV
CVDIAELRKQSQDLSQRMLAAQQKATALAGRSFNMDSPKQLQAVLFDELKLPAVLKTPKG
QPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMLNPDTGRVHTSYHQAGAA
TGRLSSSDPNLQNIPIRTDDGRRIRRAFVAPPGRKLIACDYSQIELRIMAHLSEDPGLLR
AFGSGVDVHRATAAEVFGRKLEEVTGNERRAAKAINFGLMYGMSAFGLARNLGIGRGEAQ
DYVALYFSRYPGVRDFMERMREQARTQGYVETLFGRRLYLNDINARQQGLRAGAERAAIN
APMQGTAADIIKRAMVGVDAWLQDHRDRALMILQVHDELVFEADADFVDTLLPEVTGRMS
AAAELKVPLVVDSGVGDNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagccgattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgccgccggcgagcccaccggcgcgctgttcggcgtggtcaacatg
ttgcgcgccaccctcaaggagcgccccgagtacgtggccttcgtggtcgatgcgccgggc
aagaccttccgcgacaatctgtacccgctgtacaaggccaaccggccgccgatgcccgac
gaactgcgcgcgcaggtcgagccgatgtgccagatcgtgcatgcgctgggcatcaccatc
ctgcgccaggacggggtcgaggccgacgatgtgatcggcacgttggccctgcagggcgcc
ggcgacggcctggacgtcaccatctccaccggcgacaaggatttcgcccagctggtgcgc
ccgggcgtgcagctggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atggagaagttcggggtctggccgcaccagatcgtcgacctgctggcgctgatgggcgat
gccatcgacaacgtgcccggggtggagaagtgcggccccaagaccgccgccaagtggctg
gccgaatacggctcgctggacggggtgatcgcccacgccgacagcatcaagggcaagatc
ggcgagaacctgcgcgcggcgctggagcgcctgccgctgaaccgcgaactggtcaccatc
aagaccgacgtggcgctggccggcgggccgcgcaccctgggcctgcgcgaacaggagccc
gagcagttgcgcggcctgtaccagcgttacggcttcacccaggcgttgcgcgacctggac
ggcggcgtggccgcgccggaagccgccagcgaggccacgcccagcctgcgcggcaccgcc
gccggctatgcccgggccgcggcgcctgccgccgatacggcgctggacccggcattggcc
gccaagggcgactacaccgcggtgaccactcccgagcagttcgaggaactgctggtgcgc
ctgcgcgccgccgacggcttcgccttcgacaccgagaccgacgcgctggacgcgatgcgc
gccaacctggtcggcctcagcttcgccaccgagccgggccgcgccgactacctgccgctg
ggccacgactatcccggtgcgccggtgcaactggaccgcgcgctggcgctggcgctgctc
aagccgctgctggaagacccggccaaggccaaggtcggccagcacggcaagtacgacctg
cacgtgctgcgccgccacggcgtggaggtgcgcggctatgccgacgacaccatgctggag
agcttcgtgctcaactccaccgccagccgccacgacatggactcgctggccaggcgctac
ctgggctacgacacggtcaagtacgaggacgtggccggcaagggggccaagcagatcgcc
ttctcgcaggtggccatcgacgatgccacccgctacgccgccgaggacgccgacatcacc
ctgcgcctgcaccgcaccctgtcggcgcagctggacgccgagccggcgctggcgcaggtc
taccgcgacatcgagatgccgctggtgccggtgctggcgcgggtcgaggccaacggcgtg
tgcgtggacatcgccgagctgcgcaagcagagccaggacctgagccagcgcatgctggcc
gcgcagcagaaggccaccgcgctggccgggcgcagcttcaacatggattcgcccaagcag
ctgcaggcggtgctgttcgacgaactgaagctgccggcggtgttgaagacccccaagggc
cagcccagcaccaacgaggaggcgctggaggcgatcgccgaccagcacgagctgccgcgg
gtgatcctggagtaccgcggcctggccaagctgcgcagcacctacaccgacaagctgccg
gagatgctcaatcccgacaccggccgcgtgcacaccagctaccaccaggcgggcgccgcc
accggccggctgtcctcctccgatcccaacctgcagaacatcccgatccgcaccgacgac
ggccgccgcatccgccgcgccttcgtcgccccgcccgggcgcaagctgatcgcctgcgac
tattcgcagatcgagctgcggatcatggcccacctgtccgaggatccgggcctgctgcgc
gccttcggcagcggcgtggacgtgcatcgcgccaccgccgccgaggtgttcgggcgcaag
ctcgaagaggtcaccggcaacgagcgccgcgccgccaaggcgatcaacttcggcctgatg
tacggcatgagcgcgttcggcctggcccgcaacctgggcatcggccgcggcgaggcgcag
gactacgtggcgctgtacttcagccgctacccgggtgtgcgcgacttcatggagcgcatg
cgcgagcaggcccgcactcagggctacgtggagaccctgttcggccgccgcctgtacctg
aacgacatcaacgcccgccagcaaggcctgcgcgccggtgccgagcgcgccgcgatcaac
gcgccgatgcagggtaccgccgccgacatcatcaagcgcgccatggtcggcgtggacgcc
tggctgcaggaccaccgcgaccgcgcgttgatgatcctgcaggtgcacgacgaactggtg
ttcgaagccgatgccgacttcgtcgacaccttgctgccggaagtgacggggcggatgtcc
gccgcggcggagctgaaggtcccgctggtggtggacagcggcgtgggcgacaactgggac
gaggcgcattga
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