Xanthomonas rydalmerensis: QN244_21410
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Entry
QN244_21410 CDS
T10161
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
xry Xanthomonas rydalmerensis
Pathway
xry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QN244_21410 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xry03400
]
QN244_21410 (mutM)
Enzymes [BR:
xry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QN244_21410 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QN244_21410 (mutM)
DNA repair and recombination proteins [BR:
xry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QN244_21410 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF5830
Motif
Other DBs
NCBI-ProteinID:
WOS53449
LinkDB
All DBs
Position
complement(5029763..5030575)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRRGLEPHLSGRRIHGVILRRPDLRWPIPREVAEQLPGQRIDGIRRRAKYL
LLDTAVGSALLHLGMSGSLRVLPGDTLPRAHDHVDISLEDGRVLRFNDPRRFGCLLWQAP
GETHPLLAELGPEPLSDAFDGDHLFRLSRGRTAPVKTFLMDQRIVVGVGNIYAAESLFQA
GISPLREAGEVSRARYARLAEAAKAILGYAIQRGGTTLRDFISPDGAPGYFEQELSVYGR
EGEACKRCGRTLRHASIGQRASVWCGHCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccccgaagtcgaaaccacccggcgcggcctggagccgcatctgtcgggg
cggcgcatccatggggtgatcctgcggcggccggatctgcgctggccgattccgcgggaa
gtggccgagcaattgccggggcagcgtatcgacggcatccgccggcgcgcgaagtacttg
ctgctggacactgcggtcggcagtgcattgctgcatctgggcatgtccggcagcctgcgc
gtgctgcccggcgacacgctgccgcgggcgcacgaccatgtcgacatcagcctggaagac
ggccgcgtgctgcgcttcaacgatccgcgccggttcggttgcctgctgtggcaggcgccg
ggcgaaacccatcccttgctcgccgagctggggccggagccgctgtcggatgcgttcgac
ggcgatcatttgttccggctcagccgcggccgcaccgcgccggtgaagaccttcctgatg
gatcagcgcatcgtggtcggggtgggcaacatctacgccgccgagagtctgttccaggcc
ggcatcagtccgctgcgcgaagccggcgaggtctcgcgtgcccgctacgcgcgtcttgcc
gaggccgccaaggcgatcctgggctatgcgatccagcgcggcggcacgaccctgcgcgat
ttcatcagcccggacggggcgccgggctacttcgagcaggaactgtcggtctacggccgc
gagggcgaggcctgcaagcgctgcgggcgcacgctgcgccatgccagcatcggtcagcgc
gccagtgtctggtgcggccactgccagcgctga
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