Xanthomonas sacchari: SB85_00145
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Entry
SB85_00145 CDS
T03566
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa00300
Lysine biosynthesis
xsa00470
D-Amino acid metabolism
xsa01100
Metabolic pathways
xsa01110
Biosynthesis of secondary metabolites
xsa01120
Microbial metabolism in diverse environments
xsa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SB85_00145
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SB85_00145
Enzymes [BR:
xsa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SB85_00145
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJC44425
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All DBs
Position
complement(32171..33424)
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AA seq
417 aa
AA seq
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MSLRIDSAPLHAALAQLRAQADGPVCAYVYDLAALQAHAAMLRAHLPAECELFYAAKANA
EPPVLRTLAPWVDGFEAASGGELQWLHTHQPGRRLLFGGPGKLDAELQLAASLPDCSVHV
ESLGELQRLARIAASHTRPLSVFLRLNIVVPGMQDTRLVMGGRPSPFGLDVDDLDAAMQV
LRGASGLRLDGFHFHLLSHQRDAQLQLRLIAHYLQTVQGWRQAYGLGPLTVNAGGGFGVD
YADPAASFDWAAFCAGLPALLRTHGQGLRLRLEPGRYVSAACGWYLMEVLDIKRSHGAQF
AIGRGGTHHFRTPAAQGHDHPFLVLRGTQPPVLRDARVTLVGQLCTPKDVLARDQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMLFLDGPAQAADTMPQRRIADPAAAAS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgattccgccccactgcacgcggcgctggcgcagttgcgcgcgcag
gccgacggcccggtctgcgcctatgtctacgacctggcggcgctgcaggcgcatgcggcg
atgctgcgcgcacacctgccggccgagtgcgagctgttctatgcggccaaggccaacgcc
gagccccccgtgctgcgcacgctggcaccgtgggtggacggtttcgaggcggcctccggc
ggcgaactgcaatggctgcacacgcaccagccgggccgccggctgctgttcggcggcccc
ggcaagctcgatgccgaactgcagctggccgccagcctgcccgactgcagcgtgcacgtg
gaaagcctgggcgagctgcagcgactggcgcgcatcgccgcgtcgcacacgcggccgctg
tcggtgttcctgcgcctgaacatcgtggtgccgggcatgcaggacacgcgcctggtgatg
ggcgggcggccctcgccgttcggcctggacgtggacgatctggacgccgcgatgcaggtg
ctgcgtggcgcgagcggactgcgcctggacggcttccacttccacctgctgtcgcaccag
cgcgatgcgcagctgcagttgcggctgatcgcacactacctgcagaccgtgcagggctgg
cgccaagcctatggattgggaccgctgacggtgaatgccggtggcggcttcggcgtggac
tacgccgatcctgcggcctcgttcgactgggccgcgttctgcgccgggttgccggcgctg
ctgcgcacgcacggccaaggcctgcgccttcgcctggagccgggtcgctacgtcagcgcc
gcctgcggctggtacctgatggaagtgctggacatcaagcgcagccatggcgcgcagttc
gcgatcggccgcggcggcacccatcatttccgcacgcctgccgcgcagggccacgaccat
ccgttcctggtgctgcgcggcacgcagccgccggtgctgcgcgatgcgcgggtgaccctg
gtcggccagttgtgcacgcccaaggacgtgctggcccgcgaccagccggtggccgcgctg
gcgccgggcgactgcctggcgttcccgctggccggcgcctacgcctggaacatctcgcac
cagcagttcctgatgcatccaccgccgcagatgctgttcctcgacggcccggcgcaggcc
gcggacacgatgccgcagcgccgcattgccgacccggccgccgcggcgtcatga
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