Xanthomonas sacchari: SB85_01060
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Entry
SB85_01060 CDS
T03566
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xsa
Xanthomonas sacchari
Pathway
xsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SB85_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xsa03019
]
SB85_01060
Enzymes [BR:
xsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SB85_01060
Messenger RNA biogenesis [BR:
xsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SB85_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3136
DUF6448
Motif
Other DBs
NCBI-ProteinID:
AJC47441
LinkDB
All DBs
Position
280380..281798
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AA seq
472 aa
AA seq
DB search
MWVSPPFGNPATRYGSAIINPPVPSPFTLRAIPRDQHPISRKDISPNALRVLYRLREAGF
GAYLVGGAVRDLLVQVQPKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVYGREIIEV
ATFRANVDDGSGDREVDNGRLVRDNVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGF
EDVQARLMKLIGDPEQRYREDPVRMLRAVRLAAKLDFEIEAGTAEPIPRLAGLLAEAAPA
RLFEEVLKLFLSGHGVASFEGLERHGLLAALFPESAAALRSNRSGALRRMLIEGLRNTDN
RVANDEPVSPAFLFALLLWPAYCRALMTLQKQGMQMEEAQRRAADRVTLHQLSTVALPRR
FSLPMQEIWLLQSRFTSRQRKRVVRTLSHPRFRAAFDFLIVRQSASDEHAADIAYWRELQ
QQPGYAPPPRGFDPEVDYAGDELAFAPPADSEETPKRRRRRRRRPDAATPVE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atatgggtctcgccgcccttcggcaatcccgcaacccgatacggaagcgccatcatcaat
ccgccagttccatcgccattcaccctgcgcgcgatcccgcgcgatcagcaccccatctcg
cgcaaggacatcagccccaacgccctgcgcgtgctgtaccggctgcgcgaggccggcttc
ggcgcctacttggtcggcggcgcggtccgcgacctgctggtccaggtccagcccaaggat
ttcgacgtcgccaccgacgccacccccgagcaggtcaagcagttgttccgcaactgccgc
ctgatcggccgccgcttccgcctggcgcacgtggtctacggccgcgagatcatcgaggtc
gccaccttccgcgccaatgtcgacgacggcagcggcgaccgcgaggtggacaacggccgc
ctggtccgcgacaacgtctacggcagcatcgaggacgatgcggtgcgccgcgacttcacc
tgcaacgccttgtactacgccatcgaggacttctcggtgcgcgactacaccggcggcttc
gaggacgtgcaggcgcggctgatgaagctgatcggcgaccccgagcagcgctaccgcgag
gacccggtgcgcatgctgcgtgcggtgcgcctggcggccaagctcgatttcgagatcgag
gccggcaccgccgagccgatcccgcgcctggccgggttgctggccgaggccgcgccggca
cggttgttcgaggaagtgctcaagctgttcctgtccggccatggcgtggccagcttcgag
gggctggagcggcacggcctgctcgccgcgctgttcccggagagcgcggcggcgctgcgc
tccaaccgtagcggcgcgttgcggcggatgctgatcgagggcctgcgcaacaccgacaac
cgtgtcgccaacgacgagccggtgtcgccggcgttcctgttcgcgctgctgctgtggccg
gcgtactgccgcgcgctgatgaccctgcagaagcagggcatgcagatggaggaggcgcaa
cgccgcgccgccgaccgggtgaccctgcaccagctgagcaccgtggcgctgccgcggcgc
ttctcgctgccgatgcaggagatctggctgctgcagtcccgcttcacctcgcgccagcgc
aagcgggtggtgcgcacgctgtcgcatccgcgcttccgcgctgcgttcgatttcctgatc
gtgcgccagtccgcgtcggacgagcacgcggccgacatcgcctattggcgcgaactgcag
cagcagcccggctacgcgccgccgccgcgcggcttcgatccggaggtggactacgccggc
gacgagctggcgttcgcgccgccggccgacagcgaagagacccccaagcgccgccggcgc
cggcgccgccgcccggacgccgccacgcccgtcgagtga
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